Gene : Tp57577_TGAC_v2_gene11692 T. pratense v2
Defline:  (1 of 1) K15376 - gephyrin (GPHN) Genomic Order:  748
Name:  ? Tp57577_TGAC_v2_gene11692 Secondary Identifier:  ? PAC:35964837
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6823 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11692 0.5kb upstream 0.5kb upstream 8303 true Tp57577_TGAC_v2_LG4: 6902736-6911038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 6902736-6903235 Trifolium pratense
Tp57577_TGAC_v2_gene11692 0.5kb downstream 0.5kb downstream 8303 true Tp57577_TGAC_v2_LG4: 6903236-6911538 Trifolium pratense
Tp57577_TGAC_v2_gene11692 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 6911039-6911538 Trifolium pratense
Tp57577_TGAC_v2_gene11692 1.0kb upstream 1.0kb upstream 8803 true Tp57577_TGAC_v2_LG4: 6902236-6911038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 6902236-6903235 Trifolium pratense
Tp57577_TGAC_v2_gene11692 1.0kb downstream 1.0kb downstream 8803 true Tp57577_TGAC_v2_LG4: 6903236-6912038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 6911039-6912038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 2.0kb upstream 2.0kb upstream 9803 true Tp57577_TGAC_v2_LG4: 6901236-6911038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 6901236-6903235 Trifolium pratense
Tp57577_TGAC_v2_gene11692 2.0kb downstream 2.0kb downstream 9803 true Tp57577_TGAC_v2_LG4: 6903236-6913038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 6911039-6913038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 5.0kb upstream 5.0kb upstream 12803 true Tp57577_TGAC_v2_LG4: 6898236-6911038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 6898236-6903235 Trifolium pratense
Tp57577_TGAC_v2_gene11692 5.0kb downstream 5.0kb downstream 12803 true Tp57577_TGAC_v2_LG4: 6903236-6916038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 6911039-6916038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 10.0kb upstream 10.0kb upstream 17803 true Tp57577_TGAC_v2_LG4: 6893236-6911038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 6893236-6903235 Trifolium pratense
Tp57577_TGAC_v2_gene11692 10.0kb downstream 10.0kb downstream 17803 true Tp57577_TGAC_v2_LG4: 6903236-6921038 Trifolium pratense
Tp57577_TGAC_v2_gene11692 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 6911039-6921038 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305887 5265 Fabidae View MSA
124064569 5270 Rosid View MSA
123736843 5271 Pentapetalae View MSA
122786298 5272 Eudicot View MSA
122044086 5273 Angiosperm View MSA
121347061 5274 Embryophyte View MSA
123428395 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain