Gene : Tp57577_TGAC_v2_gene11308 T. pratense v2

Defline:  (1 of 5) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB) Genomic Order:  1606
Name:  ? Tp57577_TGAC_v2_gene11308 Secondary Identifier:  ? PAC:35963837

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11308 0.5kb upstream 0.5kb upstream 5541 true Tp57577_TGAC_v2_LG4: 15249027-15254567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 15249027-15249526 Trifolium pratense
Tp57577_TGAC_v2_gene11308 0.5kb downstream 0.5kb downstream 5541 true Tp57577_TGAC_v2_LG4: 15249527-15255067 Trifolium pratense
Tp57577_TGAC_v2_gene11308 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 15254568-15255067 Trifolium pratense
Tp57577_TGAC_v2_gene11308 1.0kb upstream 1.0kb upstream 6041 true Tp57577_TGAC_v2_LG4: 15248527-15254567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 15248527-15249526 Trifolium pratense
Tp57577_TGAC_v2_gene11308 1.0kb downstream 1.0kb downstream 6041 true Tp57577_TGAC_v2_LG4: 15249527-15255567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 15254568-15255567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 2.0kb upstream 2.0kb upstream 7041 true Tp57577_TGAC_v2_LG4: 15247527-15254567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 15247527-15249526 Trifolium pratense
Tp57577_TGAC_v2_gene11308 2.0kb downstream 2.0kb downstream 7041 true Tp57577_TGAC_v2_LG4: 15249527-15256567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 15254568-15256567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 5.0kb upstream 5.0kb upstream 10041 true Tp57577_TGAC_v2_LG4: 15244527-15254567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 15244527-15249526 Trifolium pratense
Tp57577_TGAC_v2_gene11308 5.0kb downstream 5.0kb downstream 10041 true Tp57577_TGAC_v2_LG4: 15249527-15259567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 15254568-15259567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 10.0kb upstream 10.0kb upstream 15041 true Tp57577_TGAC_v2_LG4: 15239527-15254567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 15239527-15249526 Trifolium pratense
Tp57577_TGAC_v2_gene11308 10.0kb downstream 10.0kb downstream 15041 true Tp57577_TGAC_v2_LG4: 15249527-15264567 Trifolium pratense
Tp57577_TGAC_v2_gene11308 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 15254568-15264567 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314668 5265 Fabidae View MSA
124068793 5270 Rosid View MSA
123737667 5271 Pentapetalae View MSA
122785894 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain