Gene : Tp57577_TGAC_v2_gene11252 T. pratense v2
Defline:  (1 of 1) K02716 - photosystem II oxygen-evolving enhancer protein 1 (psbO) Genomic Order:  619
Name:  ? Tp57577_TGAC_v2_gene11252 Secondary Identifier:  ? PAC:35964073
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11252 0.5kb upstream 0.5kb upstream 2647 true Tp57577_TGAC_v2_LG4: 5496243-5498889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 5496243-5496742 Trifolium pratense
Tp57577_TGAC_v2_gene11252 0.5kb downstream 0.5kb downstream 2647 true Tp57577_TGAC_v2_LG4: 5496743-5499389 Trifolium pratense
Tp57577_TGAC_v2_gene11252 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 5498890-5499389 Trifolium pratense
Tp57577_TGAC_v2_gene11252 1.0kb upstream 1.0kb upstream 3147 true Tp57577_TGAC_v2_LG4: 5495743-5498889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 5495743-5496742 Trifolium pratense
Tp57577_TGAC_v2_gene11252 1.0kb downstream 1.0kb downstream 3147 true Tp57577_TGAC_v2_LG4: 5496743-5499889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 5498890-5499889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 2.0kb upstream 2.0kb upstream 4147 true Tp57577_TGAC_v2_LG4: 5494743-5498889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 5494743-5496742 Trifolium pratense
Tp57577_TGAC_v2_gene11252 2.0kb downstream 2.0kb downstream 4147 true Tp57577_TGAC_v2_LG4: 5496743-5500889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 5498890-5500889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 5.0kb upstream 5.0kb upstream 7147 true Tp57577_TGAC_v2_LG4: 5491743-5498889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 5491743-5496742 Trifolium pratense
Tp57577_TGAC_v2_gene11252 5.0kb downstream 5.0kb downstream 7147 true Tp57577_TGAC_v2_LG4: 5496743-5503889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 5498890-5503889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 10.0kb upstream 10.0kb upstream 12147 true Tp57577_TGAC_v2_LG4: 5486743-5498889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 5486743-5496742 Trifolium pratense
Tp57577_TGAC_v2_gene11252 10.0kb downstream 10.0kb downstream 12147 true Tp57577_TGAC_v2_LG4: 5496743-5508889 Trifolium pratense
Tp57577_TGAC_v2_gene11252 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 5498890-5508889 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310095 5265 Fabidae View MSA
124063467 5270 Rosid View MSA
123739417 5271 Pentapetalae View MSA
122788254 5272 Eudicot View MSA
122047967 5273 Angiosperm View MSA
121344212 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain