Gene : Tp57577_TGAC_v2_gene11795 T. pratense v2
Defline:  (1 of 2) K03405 - magnesium chelatase subunit I (chlI, bchI) Genomic Order:  822
Name:  ? Tp57577_TGAC_v2_gene11795 Secondary Identifier:  ? PAC:35964993
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CHLOROPHYLL-SYN Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11795 0.5kb upstream 0.5kb upstream 3042 true Tp57577_TGAC_v2_LG4: 7460471-7463512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 7460471-7460970 Trifolium pratense
Tp57577_TGAC_v2_gene11795 0.5kb downstream 0.5kb downstream 3042 true Tp57577_TGAC_v2_LG4: 7460971-7464012 Trifolium pratense
Tp57577_TGAC_v2_gene11795 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 7463513-7464012 Trifolium pratense
Tp57577_TGAC_v2_gene11795 1.0kb upstream 1.0kb upstream 3542 true Tp57577_TGAC_v2_LG4: 7459971-7463512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 7459971-7460970 Trifolium pratense
Tp57577_TGAC_v2_gene11795 1.0kb downstream 1.0kb downstream 3542 true Tp57577_TGAC_v2_LG4: 7460971-7464512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 7463513-7464512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 2.0kb upstream 2.0kb upstream 4542 true Tp57577_TGAC_v2_LG4: 7458971-7463512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 7458971-7460970 Trifolium pratense
Tp57577_TGAC_v2_gene11795 2.0kb downstream 2.0kb downstream 4542 true Tp57577_TGAC_v2_LG4: 7460971-7465512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 7463513-7465512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 5.0kb upstream 5.0kb upstream 7542 true Tp57577_TGAC_v2_LG4: 7455971-7463512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 7455971-7460970 Trifolium pratense
Tp57577_TGAC_v2_gene11795 5.0kb downstream 5.0kb downstream 7542 true Tp57577_TGAC_v2_LG4: 7460971-7468512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 7463513-7468512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 10.0kb upstream 10.0kb upstream 12542 true Tp57577_TGAC_v2_LG4: 7450971-7463512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 7450971-7460970 Trifolium pratense
Tp57577_TGAC_v2_gene11795 10.0kb downstream 10.0kb downstream 12542 true Tp57577_TGAC_v2_LG4: 7460971-7473512 Trifolium pratense
Tp57577_TGAC_v2_gene11795 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 7463513-7473512 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
122313972 5265 Fabidae View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain