Gene : Tp57577_TGAC_v2_gene11735 T. pratense v2
Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  835
Name:  ? Tp57577_TGAC_v2_gene11735 Secondary Identifier:  ? PAC:35966059
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense HISTSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11735 0.5kb upstream 0.5kb upstream 6089 true Tp57577_TGAC_v2_LG4: 7566916-7573004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 7566916-7567415 Trifolium pratense
Tp57577_TGAC_v2_gene11735 0.5kb downstream 0.5kb downstream 6089 true Tp57577_TGAC_v2_LG4: 7567416-7573504 Trifolium pratense
Tp57577_TGAC_v2_gene11735 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 7573005-7573504 Trifolium pratense
Tp57577_TGAC_v2_gene11735 1.0kb upstream 1.0kb upstream 6589 true Tp57577_TGAC_v2_LG4: 7566416-7573004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 7566416-7567415 Trifolium pratense
Tp57577_TGAC_v2_gene11735 1.0kb downstream 1.0kb downstream 6589 true Tp57577_TGAC_v2_LG4: 7567416-7574004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 7573005-7574004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 2.0kb upstream 2.0kb upstream 7589 true Tp57577_TGAC_v2_LG4: 7565416-7573004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 7565416-7567415 Trifolium pratense
Tp57577_TGAC_v2_gene11735 2.0kb downstream 2.0kb downstream 7589 true Tp57577_TGAC_v2_LG4: 7567416-7575004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 7573005-7575004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 5.0kb upstream 5.0kb upstream 10589 true Tp57577_TGAC_v2_LG4: 7562416-7573004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 7562416-7567415 Trifolium pratense
Tp57577_TGAC_v2_gene11735 5.0kb downstream 5.0kb downstream 10589 true Tp57577_TGAC_v2_LG4: 7567416-7578004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 7573005-7578004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 10.0kb upstream 10.0kb upstream 15589 true Tp57577_TGAC_v2_LG4: 7557416-7573004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 7557416-7567415 Trifolium pratense
Tp57577_TGAC_v2_gene11735 10.0kb downstream 10.0kb downstream 15589 true Tp57577_TGAC_v2_LG4: 7567416-7583004 Trifolium pratense
Tp57577_TGAC_v2_gene11735 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 7573005-7583004 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122305339 5265 Fabidae View MSA
124061773 5270 Rosid View MSA
123737700 5271 Pentapetalae View MSA
122790553 5272 Eudicot View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain