Gene : Tp57577_TGAC_v2_gene30926 T. pratense v2
Defline:  (1 of 2) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  13
Name:  ? Tp57577_TGAC_v2_gene30926 Secondary Identifier:  ? PAC:35954317
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30926 0.5kb upstream 0.5kb upstream 3266 true Tp57577_TGAC_v2_scaf_784: 76946-80211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_784: 76946-77445 Trifolium pratense
Tp57577_TGAC_v2_gene30926 0.5kb downstream 0.5kb downstream 3266 true Tp57577_TGAC_v2_scaf_784: 77446-80711 Trifolium pratense
Tp57577_TGAC_v2_gene30926 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_784: 80212-80711 Trifolium pratense
Tp57577_TGAC_v2_gene30926 1.0kb upstream 1.0kb upstream 3766 true Tp57577_TGAC_v2_scaf_784: 76446-80211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_784: 76446-77445 Trifolium pratense
Tp57577_TGAC_v2_gene30926 1.0kb downstream 1.0kb downstream 3766 true Tp57577_TGAC_v2_scaf_784: 77446-81211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_784: 80212-81211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 2.0kb upstream 2.0kb upstream 4766 true Tp57577_TGAC_v2_scaf_784: 75446-80211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_784: 75446-77445 Trifolium pratense
Tp57577_TGAC_v2_gene30926 2.0kb downstream 2.0kb downstream 4766 true Tp57577_TGAC_v2_scaf_784: 77446-82211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_784: 80212-82211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 5.0kb upstream 5.0kb upstream 7766 true Tp57577_TGAC_v2_scaf_784: 72446-80211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_784: 72446-77445 Trifolium pratense
Tp57577_TGAC_v2_gene30926 5.0kb downstream 5.0kb downstream 7766 true Tp57577_TGAC_v2_scaf_784: 77446-85211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_784: 80212-85211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 10.0kb upstream 10.0kb upstream 12766 true Tp57577_TGAC_v2_scaf_784: 67446-80211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_784: 67446-77445 Trifolium pratense
Tp57577_TGAC_v2_gene30926 10.0kb downstream 10.0kb downstream 12766 true Tp57577_TGAC_v2_scaf_784: 77446-90211 Trifolium pratense
Tp57577_TGAC_v2_gene30926 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_784: 80212-90211 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306430 5265 Fabidae View MSA
124067156 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain