Gene : Tp57577_TGAC_v2_gene11780 T. pratense v2
Defline:  (1 of 8) PTHR12411:SF371 - CATHEPSIN O Genomic Order:  799
Name:  ? Tp57577_TGAC_v2_gene11780 Secondary Identifier:  ? PAC:35965096
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11780 0.5kb upstream 0.5kb upstream 2793 true Tp57577_TGAC_v2_LG4: 7296483-7299275 Trifolium pratense
Tp57577_TGAC_v2_gene11780 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 7298776-7299275 Trifolium pratense
Tp57577_TGAC_v2_gene11780 0.5kb downstream 0.5kb downstream 2793 true Tp57577_TGAC_v2_LG4: 7295983-7298775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 7295983-7296482 Trifolium pratense
Tp57577_TGAC_v2_gene11780 1.0kb upstream 1.0kb upstream 3293 true Tp57577_TGAC_v2_LG4: 7296483-7299775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 7298776-7299775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 1.0kb downstream 1.0kb downstream 3293 true Tp57577_TGAC_v2_LG4: 7295483-7298775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 7295483-7296482 Trifolium pratense
Tp57577_TGAC_v2_gene11780 2.0kb upstream 2.0kb upstream 4293 true Tp57577_TGAC_v2_LG4: 7296483-7300775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 7298776-7300775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 2.0kb downstream 2.0kb downstream 4293 true Tp57577_TGAC_v2_LG4: 7294483-7298775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 7294483-7296482 Trifolium pratense
Tp57577_TGAC_v2_gene11780 5.0kb upstream 5.0kb upstream 7293 true Tp57577_TGAC_v2_LG4: 7296483-7303775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 7298776-7303775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 5.0kb downstream 5.0kb downstream 7293 true Tp57577_TGAC_v2_LG4: 7291483-7298775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 7291483-7296482 Trifolium pratense
Tp57577_TGAC_v2_gene11780 10.0kb upstream 10.0kb upstream 12293 true Tp57577_TGAC_v2_LG4: 7296483-7308775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 7298776-7308775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 10.0kb downstream 10.0kb downstream 12293 true Tp57577_TGAC_v2_LG4: 7286483-7298775 Trifolium pratense
Tp57577_TGAC_v2_gene11780 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 7286483-7296482 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780807 5273 Angiosperm View MSA
122297847 5265 Fabidae View MSA
124036180 5270 Rosid View MSA
123747945 5271 Pentapetalae View MSA
122772367 5272 Eudicot View MSA
121052407 5274 Embryophyte View MSA
123092456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain