Gene : Tp57577_TGAC_v2_gene21299 T. pratense v2
Defline:  (1 of 5) PF02373//PF10497 - JmjC domain, hydroxylase (JmjC) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene21299 Secondary Identifier:  ? PAC:35983113
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21299 0.5kb upstream 0.5kb upstream 8577 true Tp57577_TGAC_v2_scaf_376: 47616-56192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_376: 47616-48115 Trifolium pratense
Tp57577_TGAC_v2_gene21299 0.5kb downstream 0.5kb downstream 8577 true Tp57577_TGAC_v2_scaf_376: 48116-56692 Trifolium pratense
Tp57577_TGAC_v2_gene21299 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_376: 56193-56692 Trifolium pratense
Tp57577_TGAC_v2_gene21299 1.0kb upstream 1.0kb upstream 9077 true Tp57577_TGAC_v2_scaf_376: 47116-56192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_376: 47116-48115 Trifolium pratense
Tp57577_TGAC_v2_gene21299 1.0kb downstream 1.0kb downstream 9077 true Tp57577_TGAC_v2_scaf_376: 48116-57192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_376: 56193-57192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 2.0kb upstream 2.0kb upstream 10077 true Tp57577_TGAC_v2_scaf_376: 46116-56192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_376: 46116-48115 Trifolium pratense
Tp57577_TGAC_v2_gene21299 2.0kb downstream 2.0kb downstream 10077 true Tp57577_TGAC_v2_scaf_376: 48116-58192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_376: 56193-58192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 5.0kb upstream 5.0kb upstream 13077 true Tp57577_TGAC_v2_scaf_376: 43116-56192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_376: 43116-48115 Trifolium pratense
Tp57577_TGAC_v2_gene21299 5.0kb downstream 5.0kb downstream 13077 true Tp57577_TGAC_v2_scaf_376: 48116-61192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_376: 56193-61192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 10.0kb upstream 10.0kb upstream 18077 true Tp57577_TGAC_v2_scaf_376: 38116-56192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_376: 38116-48115 Trifolium pratense
Tp57577_TGAC_v2_gene21299 10.0kb downstream 10.0kb downstream 18077 true Tp57577_TGAC_v2_scaf_376: 48116-66192 Trifolium pratense
Tp57577_TGAC_v2_gene21299 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_376: 56193-66192 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314720 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain