Gene : Tp57577_TGAC_v2_gene17900 T. pratense v2
Defline:  (1 of 2) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  1300
Name:  ? Tp57577_TGAC_v2_gene17900 Secondary Identifier:  ? PAC:35966225
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17900 0.5kb upstream 0.5kb upstream 9125 true Tp57577_TGAC_v2_LG4: 12395475-12404599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 12395475-12395974 Trifolium pratense
Tp57577_TGAC_v2_gene17900 0.5kb downstream 0.5kb downstream 9125 true Tp57577_TGAC_v2_LG4: 12395975-12405099 Trifolium pratense
Tp57577_TGAC_v2_gene17900 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 12404600-12405099 Trifolium pratense
Tp57577_TGAC_v2_gene17900 1.0kb upstream 1.0kb upstream 9625 true Tp57577_TGAC_v2_LG4: 12394975-12404599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 12394975-12395974 Trifolium pratense
Tp57577_TGAC_v2_gene17900 1.0kb downstream 1.0kb downstream 9625 true Tp57577_TGAC_v2_LG4: 12395975-12405599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 12404600-12405599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 2.0kb upstream 2.0kb upstream 10625 true Tp57577_TGAC_v2_LG4: 12393975-12404599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 12393975-12395974 Trifolium pratense
Tp57577_TGAC_v2_gene17900 2.0kb downstream 2.0kb downstream 10625 true Tp57577_TGAC_v2_LG4: 12395975-12406599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 12404600-12406599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 5.0kb upstream 5.0kb upstream 13625 true Tp57577_TGAC_v2_LG4: 12390975-12404599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 12390975-12395974 Trifolium pratense
Tp57577_TGAC_v2_gene17900 5.0kb downstream 5.0kb downstream 13625 true Tp57577_TGAC_v2_LG4: 12395975-12409599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 12404600-12409599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 10.0kb upstream 10.0kb upstream 18625 true Tp57577_TGAC_v2_LG4: 12385975-12404599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 12385975-12395974 Trifolium pratense
Tp57577_TGAC_v2_gene17900 10.0kb downstream 10.0kb downstream 18625 true Tp57577_TGAC_v2_LG4: 12395975-12414599 Trifolium pratense
Tp57577_TGAC_v2_gene17900 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 12404600-12414599 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306014 5265 Fabidae View MSA
124064547 5270 Rosid View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain