Gene : Tp57577_TGAC_v2_gene30127 T. pratense v2

Defline:  (1 of 1) K11338 - RuvB-like protein 2 [EC:3.6.4.12] (RUVBL2, RVB2, INO80J) Genomic Order:  23
Name:  ? Tp57577_TGAC_v2_gene30127 Secondary Identifier:  ? PAC:35985031

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30127 0.5kb upstream 0.5kb upstream 3544 true Tp57577_TGAC_v2_scaf_485: 149136-152679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_485: 149136-149635 Trifolium pratense
Tp57577_TGAC_v2_gene30127 0.5kb downstream 0.5kb downstream 3544 true Tp57577_TGAC_v2_scaf_485: 149636-153179 Trifolium pratense
Tp57577_TGAC_v2_gene30127 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_485: 152680-153179 Trifolium pratense
Tp57577_TGAC_v2_gene30127 1.0kb upstream 1.0kb upstream 4044 true Tp57577_TGAC_v2_scaf_485: 148636-152679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_485: 148636-149635 Trifolium pratense
Tp57577_TGAC_v2_gene30127 1.0kb downstream 1.0kb downstream 4044 true Tp57577_TGAC_v2_scaf_485: 149636-153679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_485: 152680-153679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 2.0kb upstream 2.0kb upstream 5044 true Tp57577_TGAC_v2_scaf_485: 147636-152679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_485: 147636-149635 Trifolium pratense
Tp57577_TGAC_v2_gene30127 2.0kb downstream 2.0kb downstream 5044 true Tp57577_TGAC_v2_scaf_485: 149636-154679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_485: 152680-154679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 5.0kb upstream 5.0kb upstream 8044 true Tp57577_TGAC_v2_scaf_485: 144636-152679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_485: 144636-149635 Trifolium pratense
Tp57577_TGAC_v2_gene30127 5.0kb downstream 5.0kb downstream 8044 true Tp57577_TGAC_v2_scaf_485: 149636-157679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_485: 152680-157679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 10.0kb upstream 10.0kb upstream 13044 true Tp57577_TGAC_v2_scaf_485: 139636-152679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_485: 139636-149635 Trifolium pratense
Tp57577_TGAC_v2_gene30127 10.0kb downstream 10.0kb downstream 13044 true Tp57577_TGAC_v2_scaf_485: 149636-162679 Trifolium pratense
Tp57577_TGAC_v2_gene30127 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_485: 152680-162679 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307912 5265 Fabidae View MSA
124050472 5270 Rosid View MSA
123746404 5271 Pentapetalae View MSA
122786382 5272 Eudicot View MSA
122045825 5273 Angiosperm View MSA
121346627 5274 Embryophyte View MSA
123423891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain