Gene : Tp57577_TGAC_v2_gene22272 T. pratense v2
Defline:  (1 of 3) PTHR32448:SF11 - BERBERINE BRIDGE ENZYME-RELATED Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene22272 Secondary Identifier:  ? PAC:35991626
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22272 0.5kb upstream 0.5kb upstream 2748 true Tp57577_TGAC_v2_scaf_688: 16778-19525 Trifolium pratense
Tp57577_TGAC_v2_gene22272 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_688: 19026-19525 Trifolium pratense
Tp57577_TGAC_v2_gene22272 0.5kb downstream 0.5kb downstream 2748 true Tp57577_TGAC_v2_scaf_688: 16278-19025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_688: 16278-16777 Trifolium pratense
Tp57577_TGAC_v2_gene22272 1.0kb upstream 1.0kb upstream 3248 true Tp57577_TGAC_v2_scaf_688: 16778-20025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_688: 19026-20025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 1.0kb downstream 1.0kb downstream 3248 true Tp57577_TGAC_v2_scaf_688: 15778-19025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_688: 15778-16777 Trifolium pratense
Tp57577_TGAC_v2_gene22272 2.0kb upstream 2.0kb upstream 4248 true Tp57577_TGAC_v2_scaf_688: 16778-21025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_688: 19026-21025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 2.0kb downstream 2.0kb downstream 4248 true Tp57577_TGAC_v2_scaf_688: 14778-19025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_688: 14778-16777 Trifolium pratense
Tp57577_TGAC_v2_gene22272 5.0kb upstream 5.0kb upstream 7248 true Tp57577_TGAC_v2_scaf_688: 16778-24025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_688: 19026-24025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 5.0kb downstream 5.0kb downstream 7248 true Tp57577_TGAC_v2_scaf_688: 11778-19025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_688: 11778-16777 Trifolium pratense
Tp57577_TGAC_v2_gene22272 10.0kb upstream 10.0kb upstream 12248 true Tp57577_TGAC_v2_scaf_688: 16778-29025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_688: 19026-29025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 10.0kb downstream 10.0kb downstream 12248 true Tp57577_TGAC_v2_scaf_688: 6778-19025 Trifolium pratense
Tp57577_TGAC_v2_gene22272 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_688: 6778-16777 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302697 5265 Fabidae View MSA
124070066 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain