Gene : Tp57577_TGAC_v2_gene9787 T. pratense v2
Defline:  (1 of 1) PTHR22812 - CHROMOBOX PROTEIN Genomic Order:  22
Name:  ? Tp57577_TGAC_v2_gene9787 Secondary Identifier:  ? PAC:35985431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9787 0.5kb upstream 0.5kb upstream 8049 true Tp57577_TGAC_v2_scaf_503: 155687-163735 Trifolium pratense
Tp57577_TGAC_v2_gene9787 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_503: 163236-163735 Trifolium pratense
Tp57577_TGAC_v2_gene9787 0.5kb downstream 0.5kb downstream 8049 true Tp57577_TGAC_v2_scaf_503: 155187-163235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_503: 155187-155686 Trifolium pratense
Tp57577_TGAC_v2_gene9787 1.0kb upstream 1.0kb upstream 8549 true Tp57577_TGAC_v2_scaf_503: 155687-164235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_503: 163236-164235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 1.0kb downstream 1.0kb downstream 8549 true Tp57577_TGAC_v2_scaf_503: 154687-163235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_503: 154687-155686 Trifolium pratense
Tp57577_TGAC_v2_gene9787 2.0kb upstream 2.0kb upstream 9549 true Tp57577_TGAC_v2_scaf_503: 155687-165235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_503: 163236-165235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 2.0kb downstream 2.0kb downstream 9549 true Tp57577_TGAC_v2_scaf_503: 153687-163235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_503: 153687-155686 Trifolium pratense
Tp57577_TGAC_v2_gene9787 5.0kb upstream 5.0kb upstream 12549 true Tp57577_TGAC_v2_scaf_503: 155687-168235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_503: 163236-168235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 5.0kb downstream 5.0kb downstream 12549 true Tp57577_TGAC_v2_scaf_503: 150687-163235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_503: 150687-155686 Trifolium pratense
Tp57577_TGAC_v2_gene9787 10.0kb upstream 10.0kb upstream 17549 true Tp57577_TGAC_v2_scaf_503: 155687-173235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_503: 163236-173235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 10.0kb downstream 10.0kb downstream 17549 true Tp57577_TGAC_v2_scaf_503: 145687-163235 Trifolium pratense
Tp57577_TGAC_v2_gene9787 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_503: 145687-155686 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300488 5265 Fabidae View MSA
124068397 5270 Rosid View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain