Gene : Tp57577_TGAC_v2_gene3657 T. pratense v2
Defline:  (1 of 1) PF07086 - Jagunal, ER re-organisation during oogenesis (Jagunal) Genomic Order:  45
Name:  ? Tp57577_TGAC_v2_gene3657 Secondary Identifier:  ? PAC:35961988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3657 0.5kb upstream 0.5kb upstream 6504 true Tp57577_TGAC_v2_scaf_84: 507948-514451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_84: 507948-508447 Trifolium pratense
Tp57577_TGAC_v2_gene3657 0.5kb downstream 0.5kb downstream 6504 true Tp57577_TGAC_v2_scaf_84: 508448-514951 Trifolium pratense
Tp57577_TGAC_v2_gene3657 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_84: 514452-514951 Trifolium pratense
Tp57577_TGAC_v2_gene3657 1.0kb upstream 1.0kb upstream 7004 true Tp57577_TGAC_v2_scaf_84: 507448-514451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_84: 507448-508447 Trifolium pratense
Tp57577_TGAC_v2_gene3657 1.0kb downstream 1.0kb downstream 7004 true Tp57577_TGAC_v2_scaf_84: 508448-515451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_84: 514452-515451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 2.0kb upstream 2.0kb upstream 8004 true Tp57577_TGAC_v2_scaf_84: 506448-514451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_84: 506448-508447 Trifolium pratense
Tp57577_TGAC_v2_gene3657 2.0kb downstream 2.0kb downstream 8004 true Tp57577_TGAC_v2_scaf_84: 508448-516451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_84: 514452-516451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 5.0kb upstream 5.0kb upstream 11004 true Tp57577_TGAC_v2_scaf_84: 503448-514451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_84: 503448-508447 Trifolium pratense
Tp57577_TGAC_v2_gene3657 5.0kb downstream 5.0kb downstream 11004 true Tp57577_TGAC_v2_scaf_84: 508448-519451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_84: 514452-519451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 10.0kb upstream 10.0kb upstream 16004 true Tp57577_TGAC_v2_scaf_84: 498448-514451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_84: 498448-508447 Trifolium pratense
Tp57577_TGAC_v2_gene3657 10.0kb downstream 10.0kb downstream 16004 true Tp57577_TGAC_v2_scaf_84: 508448-524451 Trifolium pratense
Tp57577_TGAC_v2_gene3657 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_84: 514452-524451 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300159 5265 Fabidae View MSA
124063562 5270 Rosid View MSA
123743270 5271 Pentapetalae View MSA
122789019 5272 Eudicot View MSA
122045382 5273 Angiosperm View MSA
121344737 5274 Embryophyte View MSA
123427393 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain