Gene : Tp57577_TGAC_v2_gene22853 T. pratense v2
Defline:  (1 of 1) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene22853 Secondary Identifier:  ? PAC:35981971
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22853 0.5kb upstream 0.5kb upstream 9227 true Tp57577_TGAC_v2_scaf_955: 1828-11054 Trifolium pratense
Tp57577_TGAC_v2_gene22853 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_955: 10555-11054 Trifolium pratense
Tp57577_TGAC_v2_gene22853 0.5kb downstream 0.5kb downstream 9227 true Tp57577_TGAC_v2_scaf_955: 1328-10554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_955: 1328-1827 Trifolium pratense
Tp57577_TGAC_v2_gene22853 1.0kb upstream 1.0kb upstream 9727 true Tp57577_TGAC_v2_scaf_955: 1828-11554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_955: 10555-11554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 1.0kb downstream 1.0kb downstream 9727 true Tp57577_TGAC_v2_scaf_955: 828-10554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_955: 828-1827 Trifolium pratense
Tp57577_TGAC_v2_gene22853 2.0kb upstream 2.0kb upstream 10727 true Tp57577_TGAC_v2_scaf_955: 1828-12554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_955: 10555-12554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 2.0kb downstream 2.0kb downstream 10554 true Tp57577_TGAC_v2_scaf_955: 1-10554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 2.0kb downstream 2.0kb downstream 1827 false Tp57577_TGAC_v2_scaf_955: 1-1827 Trifolium pratense
Tp57577_TGAC_v2_gene22853 5.0kb upstream 5.0kb upstream 13727 true Tp57577_TGAC_v2_scaf_955: 1828-15554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_955: 10555-15554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 5.0kb downstream 5.0kb downstream 10554 true Tp57577_TGAC_v2_scaf_955: 1-10554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 5.0kb downstream 5.0kb downstream 1827 false Tp57577_TGAC_v2_scaf_955: 1-1827 Trifolium pratense
Tp57577_TGAC_v2_gene22853 10.0kb upstream 10.0kb upstream 18727 true Tp57577_TGAC_v2_scaf_955: 1828-20554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_955: 10555-20554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 10.0kb downstream 10.0kb downstream 10554 true Tp57577_TGAC_v2_scaf_955: 1-10554 Trifolium pratense
Tp57577_TGAC_v2_gene22853 10.0kb downstream 10.0kb downstream 1827 false Tp57577_TGAC_v2_scaf_955: 1-1827 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122294730 5265 Fabidae View MSA
124034558 5270 Rosid View MSA
123744540 5271 Pentapetalae View MSA
122788668 5272 Eudicot View MSA
122045725 5273 Angiosperm View MSA
121344183 5274 Embryophyte View MSA
123426396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain