Gene : Tp57577_TGAC_v2_gene35355 T. pratense v2
Defline:  (1 of 1) PTHR13773:SF10 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE Genomic Order:  12
Name:  ? Tp57577_TGAC_v2_gene35355 Secondary Identifier:  ? PAC:35962284
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-1319 Trifolium pratense pathologic  
Tpratense PWY4FS-7 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35355 0.5kb upstream 0.5kb upstream 3666 true Tp57577_TGAC_v2_scaf_649: 66680-70345 Trifolium pratense
Tp57577_TGAC_v2_gene35355 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_649: 69846-70345 Trifolium pratense
Tp57577_TGAC_v2_gene35355 0.5kb downstream 0.5kb downstream 3666 true Tp57577_TGAC_v2_scaf_649: 66180-69845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_649: 66180-66679 Trifolium pratense
Tp57577_TGAC_v2_gene35355 1.0kb upstream 1.0kb upstream 4166 true Tp57577_TGAC_v2_scaf_649: 66680-70845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_649: 69846-70845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 1.0kb downstream 1.0kb downstream 4166 true Tp57577_TGAC_v2_scaf_649: 65680-69845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_649: 65680-66679 Trifolium pratense
Tp57577_TGAC_v2_gene35355 2.0kb upstream 2.0kb upstream 5166 true Tp57577_TGAC_v2_scaf_649: 66680-71845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_649: 69846-71845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 2.0kb downstream 2.0kb downstream 5166 true Tp57577_TGAC_v2_scaf_649: 64680-69845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_649: 64680-66679 Trifolium pratense
Tp57577_TGAC_v2_gene35355 5.0kb upstream 5.0kb upstream 8166 true Tp57577_TGAC_v2_scaf_649: 66680-74845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_649: 69846-74845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 5.0kb downstream 5.0kb downstream 8166 true Tp57577_TGAC_v2_scaf_649: 61680-69845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_649: 61680-66679 Trifolium pratense
Tp57577_TGAC_v2_gene35355 10.0kb upstream 10.0kb upstream 13166 true Tp57577_TGAC_v2_scaf_649: 66680-79845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_649: 69846-79845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 10.0kb downstream 10.0kb downstream 13166 true Tp57577_TGAC_v2_scaf_649: 56680-69845 Trifolium pratense
Tp57577_TGAC_v2_gene35355 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_649: 56680-66679 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296786 5265 Fabidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain