Gene : Tp57577_TGAC_v2_gene22950 T. pratense v2
Defline:  (1 of 6) PF03007//PF06974 - Wax ester synthase-like Acyl-CoA acyltransferase domain (WES_acyltransf) // Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene22950 Secondary Identifier:  ? PAC:35985557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22950 0.5kb upstream 0.5kb upstream 4211 true Tp57577_TGAC_v2_scaf_943: 61646-65856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_943: 61646-62145 Trifolium pratense
Tp57577_TGAC_v2_gene22950 0.5kb downstream 0.5kb downstream 4211 true Tp57577_TGAC_v2_scaf_943: 62146-66356 Trifolium pratense
Tp57577_TGAC_v2_gene22950 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_943: 65857-66356 Trifolium pratense
Tp57577_TGAC_v2_gene22950 1.0kb upstream 1.0kb upstream 4711 true Tp57577_TGAC_v2_scaf_943: 61146-65856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_943: 61146-62145 Trifolium pratense
Tp57577_TGAC_v2_gene22950 1.0kb downstream 1.0kb downstream 4711 true Tp57577_TGAC_v2_scaf_943: 62146-66856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_943: 65857-66856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 2.0kb upstream 2.0kb upstream 5711 true Tp57577_TGAC_v2_scaf_943: 60146-65856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_943: 60146-62145 Trifolium pratense
Tp57577_TGAC_v2_gene22950 2.0kb downstream 2.0kb downstream 5711 true Tp57577_TGAC_v2_scaf_943: 62146-67856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_943: 65857-67856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 5.0kb upstream 5.0kb upstream 8711 true Tp57577_TGAC_v2_scaf_943: 57146-65856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_943: 57146-62145 Trifolium pratense
Tp57577_TGAC_v2_gene22950 5.0kb downstream 5.0kb downstream 8711 true Tp57577_TGAC_v2_scaf_943: 62146-70856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_943: 65857-70856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 10.0kb upstream 10.0kb upstream 13711 true Tp57577_TGAC_v2_scaf_943: 52146-65856 Trifolium pratense
Tp57577_TGAC_v2_gene22950 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_943: 52146-62145 Trifolium pratense
Tp57577_TGAC_v2_gene22950 10.0kb downstream 10.0kb downstream 10976 true Tp57577_TGAC_v2_scaf_943: 62146-73121 Trifolium pratense
Tp57577_TGAC_v2_gene22950 10.0kb downstream 10.0kb downstream 7265 false Tp57577_TGAC_v2_scaf_943: 65857-73121 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313899 5265 Fabidae View MSA
124072323 5270 Rosid View MSA
123749190 5271 Pentapetalae View MSA
122797420 5272 Eudicot View MSA
122048260 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121310908 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain