Gene : Tp57577_TGAC_v2_gene27732 T. pratense v2
Defline:  (1 of 1) PF01535//PF12854//PF13041//PF14259 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene27732 Secondary Identifier:  ? PAC:35991417
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27732 0.5kb upstream 0.5kb upstream 3597 true Tp57577_TGAC_v2_scaf_851: 12576-16172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_851: 12576-13075 Trifolium pratense
Tp57577_TGAC_v2_gene27732 0.5kb downstream 0.5kb downstream 3597 true Tp57577_TGAC_v2_scaf_851: 13076-16672 Trifolium pratense
Tp57577_TGAC_v2_gene27732 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_851: 16173-16672 Trifolium pratense
Tp57577_TGAC_v2_gene27732 1.0kb upstream 1.0kb upstream 4097 true Tp57577_TGAC_v2_scaf_851: 12076-16172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_851: 12076-13075 Trifolium pratense
Tp57577_TGAC_v2_gene27732 1.0kb downstream 1.0kb downstream 4097 true Tp57577_TGAC_v2_scaf_851: 13076-17172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_851: 16173-17172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 2.0kb upstream 2.0kb upstream 5097 true Tp57577_TGAC_v2_scaf_851: 11076-16172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_851: 11076-13075 Trifolium pratense
Tp57577_TGAC_v2_gene27732 2.0kb downstream 2.0kb downstream 5097 true Tp57577_TGAC_v2_scaf_851: 13076-18172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_851: 16173-18172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 5.0kb upstream 5.0kb upstream 8097 true Tp57577_TGAC_v2_scaf_851: 8076-16172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_851: 8076-13075 Trifolium pratense
Tp57577_TGAC_v2_gene27732 5.0kb downstream 5.0kb downstream 8097 true Tp57577_TGAC_v2_scaf_851: 13076-21172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_851: 16173-21172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 10.0kb upstream 10.0kb upstream 13097 true Tp57577_TGAC_v2_scaf_851: 3076-16172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_851: 3076-13075 Trifolium pratense
Tp57577_TGAC_v2_gene27732 10.0kb downstream 10.0kb downstream 13097 true Tp57577_TGAC_v2_scaf_851: 13076-26172 Trifolium pratense
Tp57577_TGAC_v2_gene27732 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_851: 16173-26172 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300709 5265 Fabidae View MSA
124060522 5270 Rosid View MSA
123738847 5271 Pentapetalae View MSA
122790244 5272 Eudicot View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain