Gene : Tp57577_TGAC_v2_gene28027 T. pratense v2
Defline:  (1 of 1) K14321 - nucleoporin-like protein 2 (NUPL2, CG1) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene28027 Secondary Identifier:  ? PAC:35961014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28027 0.5kb upstream 0.5kb upstream 5558 true Tp57577_TGAC_v2_scaf_866: 11768-17325 Trifolium pratense
Tp57577_TGAC_v2_gene28027 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_866: 16826-17325 Trifolium pratense
Tp57577_TGAC_v2_gene28027 0.5kb downstream 0.5kb downstream 5558 true Tp57577_TGAC_v2_scaf_866: 11268-16825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_866: 11268-11767 Trifolium pratense
Tp57577_TGAC_v2_gene28027 1.0kb upstream 1.0kb upstream 6058 true Tp57577_TGAC_v2_scaf_866: 11768-17825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_866: 16826-17825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 1.0kb downstream 1.0kb downstream 6058 true Tp57577_TGAC_v2_scaf_866: 10768-16825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_866: 10768-11767 Trifolium pratense
Tp57577_TGAC_v2_gene28027 2.0kb upstream 2.0kb upstream 7058 true Tp57577_TGAC_v2_scaf_866: 11768-18825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_866: 16826-18825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 2.0kb downstream 2.0kb downstream 7058 true Tp57577_TGAC_v2_scaf_866: 9768-16825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_866: 9768-11767 Trifolium pratense
Tp57577_TGAC_v2_gene28027 5.0kb upstream 5.0kb upstream 10058 true Tp57577_TGAC_v2_scaf_866: 11768-21825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_866: 16826-21825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 5.0kb downstream 5.0kb downstream 10058 true Tp57577_TGAC_v2_scaf_866: 6768-16825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_866: 6768-11767 Trifolium pratense
Tp57577_TGAC_v2_gene28027 10.0kb upstream 10.0kb upstream 15058 true Tp57577_TGAC_v2_scaf_866: 11768-26825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_866: 16826-26825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 10.0kb downstream 10.0kb downstream 15058 true Tp57577_TGAC_v2_scaf_866: 1768-16825 Trifolium pratense
Tp57577_TGAC_v2_gene28027 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_866: 1768-11767 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041238 5273 Angiosperm View MSA
122308131 5265 Fabidae View MSA
124063657 5270 Rosid View MSA
123741222 5271 Pentapetalae View MSA
122788584 5272 Eudicot View MSA
121343991 5274 Embryophyte View MSA
123425517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain