Gene : MicpuC2.est_orfs.6_8581_4275370:1 M. pusilla CCMP1545 v3.0

Defline:  (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 Genomic Order:  338
Name:  ? MicpuC2.est_orfs.6_8581_4275370:1 Secondary Identifier:  ? PAC:27347892

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MicpuC2.est_orfs.6_8581_4275370:1 0.5kb upstream 0.5kb upstream 3421 true scaffold_6: 689857-693277 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 692778-693277 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 0.5kb downstream 0.5kb downstream 3421 true scaffold_6: 689357-692777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 689357-689856 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 1.0kb upstream 1.0kb upstream 3921 true scaffold_6: 689857-693777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 692778-693777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 1.0kb downstream 1.0kb downstream 3921 true scaffold_6: 688857-692777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 688857-689856 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 2.0kb upstream 2.0kb upstream 4921 true scaffold_6: 689857-694777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 692778-694777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 2.0kb downstream 2.0kb downstream 4921 true scaffold_6: 687857-692777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 687857-689856 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 5.0kb upstream 5.0kb upstream 7921 true scaffold_6: 689857-697777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 692778-697777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 5.0kb downstream 5.0kb downstream 7921 true scaffold_6: 684857-692777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 684857-689856 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 10.0kb upstream 10.0kb upstream 12921 true scaffold_6: 689857-702777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 692778-702777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 10.0kb downstream 10.0kb downstream 12921 true scaffold_6: 679857-692777 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.6_8581_4275370:1 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 679857-689856 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112633 5260 Chlorophyte View MSA
123424068 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier