Gene : estExt_Genewise1Plus.C_3_t40090 M. pusilla CCMP1545 v3.0
Defline:  (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  835
Name:  ? estExt_Genewise1Plus.C_3_t40090 Secondary Identifier:  ? PAC:27346838
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MpusillaCCMP1545 ARO-PWY Micromonas pusilla CCMP1545 pathologic  
MpusillaCCMP1545 PWY-6163 Micromonas pusilla CCMP1545 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genewise1Plus.C_3_t40090 0.5kb upstream 0.5kb upstream 2030 true scaffold_3: 1646148-1648177 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1647678-1648177 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 0.5kb downstream 0.5kb downstream 2030 true scaffold_3: 1645648-1647677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1645648-1646147 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 1.0kb upstream 1.0kb upstream 2530 true scaffold_3: 1646148-1648677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1647678-1648677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 1.0kb downstream 1.0kb downstream 2530 true scaffold_3: 1645148-1647677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1645148-1646147 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 2.0kb upstream 2.0kb upstream 3530 true scaffold_3: 1646148-1649677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1647678-1649677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 2.0kb downstream 2.0kb downstream 3530 true scaffold_3: 1644148-1647677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1644148-1646147 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 5.0kb upstream 5.0kb upstream 6530 true scaffold_3: 1646148-1652677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1647678-1652677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 5.0kb downstream 5.0kb downstream 6530 true scaffold_3: 1641148-1647677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1641148-1646147 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 10.0kb upstream 10.0kb upstream 11530 true scaffold_3: 1646148-1657677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1647678-1657677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 10.0kb downstream 10.0kb downstream 11530 true scaffold_3: 1636148-1647677 Micromonas pusilla CCMP1545
estExt_Genewise1Plus.C_3_t40090 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1636148-1646147 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110609 5260 Chlorophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier