Gene : Solyc02g030340.1 S. lycopersicum ITAG2.4
Defline:  (1 of 93) PF01453 - D-mannose binding lectin (B_lectin) Description:  S-locus glycoprotein (Fragment) (AHRD V1 ***- A6P327_BRANA); contains Interpro domain(s) IPR001480 Curculin-like (mannose-binding) lectin
Genomic Order:  399 Name:  ? Solyc02g030340.1
Secondary Identifier:  ? PAC:36157596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g030340.1 0.5kb upstream 0.5kb upstream 896 true SL2.50ch02: 25524843-25525738 Solanum lycopersicum
Solyc02g030340.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 25524843-25525342 Solanum lycopersicum
Solyc02g030340.1 0.5kb downstream 0.5kb downstream 896 true SL2.50ch02: 25525343-25526238 Solanum lycopersicum
Solyc02g030340.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 25525739-25526238 Solanum lycopersicum
Solyc02g030340.1 1.0kb upstream 1.0kb upstream 1396 true SL2.50ch02: 25524343-25525738 Solanum lycopersicum
Solyc02g030340.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 25524343-25525342 Solanum lycopersicum
Solyc02g030340.1 1.0kb downstream 1.0kb downstream 1396 true SL2.50ch02: 25525343-25526738 Solanum lycopersicum
Solyc02g030340.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 25525739-25526738 Solanum lycopersicum
Solyc02g030340.1 2.0kb upstream 2.0kb upstream 2396 true SL2.50ch02: 25523343-25525738 Solanum lycopersicum
Solyc02g030340.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 25523343-25525342 Solanum lycopersicum
Solyc02g030340.1 2.0kb downstream 2.0kb downstream 2396 true SL2.50ch02: 25525343-25527738 Solanum lycopersicum
Solyc02g030340.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 25525739-25527738 Solanum lycopersicum
Solyc02g030340.1 5.0kb upstream 5.0kb upstream 5396 true SL2.50ch02: 25520343-25525738 Solanum lycopersicum
Solyc02g030340.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 25520343-25525342 Solanum lycopersicum
Solyc02g030340.1 5.0kb downstream 5.0kb downstream 5396 true SL2.50ch02: 25525343-25530738 Solanum lycopersicum
Solyc02g030340.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 25525739-25530738 Solanum lycopersicum
Solyc02g030340.1 10.0kb upstream 10.0kb upstream 10396 true SL2.50ch02: 25515343-25525738 Solanum lycopersicum
Solyc02g030340.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 25515343-25525342 Solanum lycopersicum
Solyc02g030340.1 10.0kb downstream 10.0kb downstream 10396 true SL2.50ch02: 25525343-25535738 Solanum lycopersicum
Solyc02g030340.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 25525739-25535738 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481173 5263 Asterids View MSA
123753273 5271 Pentapetalae View MSA
122775025 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain