Gene : Solyc02g022930.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase Description:  3-hydroxyisobutyrate dehydrogenase-like protein (AHRD V1 ***- Q1ECP8_ARATH); contains Interpro domain(s) IPR011548 3-hydroxyisobutyrate dehydrogenase
Genomic Order:  356 Name:  ? Solyc02g022930.2
Secondary Identifier:  ? PAC:36156733
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum VALDEG-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g022930.2 0.5kb upstream 0.5kb upstream 14587 true SL2.50ch02: 24428153-24442739 Solanum lycopersicum
Solyc02g022930.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 24442240-24442739 Solanum lycopersicum
Solyc02g022930.2 0.5kb downstream 0.5kb downstream 14587 true SL2.50ch02: 24427653-24442239 Solanum lycopersicum
Solyc02g022930.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 24427653-24428152 Solanum lycopersicum
Solyc02g022930.2 1.0kb upstream 1.0kb upstream 15087 true SL2.50ch02: 24428153-24443239 Solanum lycopersicum
Solyc02g022930.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 24442240-24443239 Solanum lycopersicum
Solyc02g022930.2 1.0kb downstream 1.0kb downstream 15087 true SL2.50ch02: 24427153-24442239 Solanum lycopersicum
Solyc02g022930.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 24427153-24428152 Solanum lycopersicum
Solyc02g022930.2 2.0kb upstream 2.0kb upstream 16087 true SL2.50ch02: 24428153-24444239 Solanum lycopersicum
Solyc02g022930.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 24442240-24444239 Solanum lycopersicum
Solyc02g022930.2 2.0kb downstream 2.0kb downstream 16087 true SL2.50ch02: 24426153-24442239 Solanum lycopersicum
Solyc02g022930.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 24426153-24428152 Solanum lycopersicum
Solyc02g022930.2 5.0kb upstream 5.0kb upstream 19087 true SL2.50ch02: 24428153-24447239 Solanum lycopersicum
Solyc02g022930.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 24442240-24447239 Solanum lycopersicum
Solyc02g022930.2 5.0kb downstream 5.0kb downstream 19087 true SL2.50ch02: 24423153-24442239 Solanum lycopersicum
Solyc02g022930.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 24423153-24428152 Solanum lycopersicum
Solyc02g022930.2 10.0kb upstream 10.0kb upstream 24087 true SL2.50ch02: 24428153-24452239 Solanum lycopersicum
Solyc02g022930.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 24442240-24452239 Solanum lycopersicum
Solyc02g022930.2 10.0kb downstream 10.0kb downstream 24087 true SL2.50ch02: 24418153-24442239 Solanum lycopersicum
Solyc02g022930.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 24418153-24428152 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466493 5263 Asterids View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain