Gene : Solyc05g055600.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11679:SF1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33B Description:  Vacuolar protein-sorting protein 33 (AHRD V1 ***- B6T8U3_MAIZE); contains Interpro domain(s) IPR001619 Sec1-like protein
Genomic Order:  2319 Name:  ? Solyc05g055600.2
Secondary Identifier:  ? PAC:36144253
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g055600.2 0.5kb upstream 0.5kb upstream 7767 true SL2.50ch05: 65164303-65172069 Solanum lycopersicum
Solyc05g055600.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 65164303-65164802 Solanum lycopersicum
Solyc05g055600.2 0.5kb downstream 0.5kb downstream 7767 true SL2.50ch05: 65164803-65172569 Solanum lycopersicum
Solyc05g055600.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 65172070-65172569 Solanum lycopersicum
Solyc05g055600.2 1.0kb upstream 1.0kb upstream 8267 true SL2.50ch05: 65163803-65172069 Solanum lycopersicum
Solyc05g055600.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 65163803-65164802 Solanum lycopersicum
Solyc05g055600.2 1.0kb downstream 1.0kb downstream 8267 true SL2.50ch05: 65164803-65173069 Solanum lycopersicum
Solyc05g055600.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 65172070-65173069 Solanum lycopersicum
Solyc05g055600.2 2.0kb upstream 2.0kb upstream 9267 true SL2.50ch05: 65162803-65172069 Solanum lycopersicum
Solyc05g055600.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 65162803-65164802 Solanum lycopersicum
Solyc05g055600.2 2.0kb downstream 2.0kb downstream 9267 true SL2.50ch05: 65164803-65174069 Solanum lycopersicum
Solyc05g055600.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 65172070-65174069 Solanum lycopersicum
Solyc05g055600.2 5.0kb upstream 5.0kb upstream 12267 true SL2.50ch05: 65159803-65172069 Solanum lycopersicum
Solyc05g055600.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 65159803-65164802 Solanum lycopersicum
Solyc05g055600.2 5.0kb downstream 5.0kb downstream 12267 true SL2.50ch05: 65164803-65177069 Solanum lycopersicum
Solyc05g055600.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 65172070-65177069 Solanum lycopersicum
Solyc05g055600.2 10.0kb upstream 10.0kb upstream 17267 true SL2.50ch05: 65154803-65172069 Solanum lycopersicum
Solyc05g055600.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 65154803-65164802 Solanum lycopersicum
Solyc05g055600.2 10.0kb downstream 10.0kb downstream 17267 true SL2.50ch05: 65164803-65182069 Solanum lycopersicum
Solyc05g055600.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 65172070-65182069 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471735 5263 Asterids View MSA
123752056 5271 Pentapetalae View MSA
122787734 5272 Eudicot View MSA
122044199 5273 Angiosperm View MSA
121343889 5274 Embryophyte View MSA
123428072 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain