Gene : Solyc05g056260.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11538:SF41 - PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL Description:  Phenylalanyl-tRNA synthetase alpha chain (AHRD V1 *-** Q5N0F1_SYNP6); contains Interpro domain(s) IPR004530 Phenylalanyl-tRNA synthetase, class IIc, mitochondrial
Genomic Order:  2385 Name:  ? Solyc05g056260.2
Secondary Identifier:  ? PAC:36144435
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g056260.2 0.5kb upstream 0.5kb upstream 4919 true SL2.50ch05: 65609553-65614471 Solanum lycopersicum
Solyc05g056260.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 65613972-65614471 Solanum lycopersicum
Solyc05g056260.2 0.5kb downstream 0.5kb downstream 4919 true SL2.50ch05: 65609053-65613971 Solanum lycopersicum
Solyc05g056260.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 65609053-65609552 Solanum lycopersicum
Solyc05g056260.2 1.0kb upstream 1.0kb upstream 5419 true SL2.50ch05: 65609553-65614971 Solanum lycopersicum
Solyc05g056260.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 65613972-65614971 Solanum lycopersicum
Solyc05g056260.2 1.0kb downstream 1.0kb downstream 5419 true SL2.50ch05: 65608553-65613971 Solanum lycopersicum
Solyc05g056260.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 65608553-65609552 Solanum lycopersicum
Solyc05g056260.2 2.0kb upstream 2.0kb upstream 6419 true SL2.50ch05: 65609553-65615971 Solanum lycopersicum
Solyc05g056260.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 65613972-65615971 Solanum lycopersicum
Solyc05g056260.2 2.0kb downstream 2.0kb downstream 6419 true SL2.50ch05: 65607553-65613971 Solanum lycopersicum
Solyc05g056260.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 65607553-65609552 Solanum lycopersicum
Solyc05g056260.2 5.0kb upstream 5.0kb upstream 9419 true SL2.50ch05: 65609553-65618971 Solanum lycopersicum
Solyc05g056260.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 65613972-65618971 Solanum lycopersicum
Solyc05g056260.2 5.0kb downstream 5.0kb downstream 9419 true SL2.50ch05: 65604553-65613971 Solanum lycopersicum
Solyc05g056260.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 65604553-65609552 Solanum lycopersicum
Solyc05g056260.2 10.0kb upstream 10.0kb upstream 14419 true SL2.50ch05: 65609553-65623971 Solanum lycopersicum
Solyc05g056260.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 65613972-65623971 Solanum lycopersicum
Solyc05g056260.2 10.0kb downstream 10.0kb downstream 14419 true SL2.50ch05: 65599553-65613971 Solanum lycopersicum
Solyc05g056260.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 65599553-65609552 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468268 5263 Asterids View MSA
123737426 5271 Pentapetalae View MSA
122793122 5272 Eudicot View MSA
122044413 5273 Angiosperm View MSA
121344364 5274 Embryophyte View MSA
123424081 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain