Gene : Solyc05g055920.2 S. lycopersicum ITAG2.4
Defline:  (1 of 105) PF00168 - C2 domain (C2) Description:  C2 domain-containing protein (AHRD V1 *--- D7LFS6_ARALY); contains Interpro domain(s) IPR018029 C2 membrane targeting protein
Genomic Order:  2351 Name:  ? Solyc05g055920.2
Secondary Identifier:  ? PAC:36144936
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g055920.2 0.5kb upstream 0.5kb upstream 2756 true SL2.50ch05: 65366060-65368815 Solanum lycopersicum
Solyc05g055920.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 65368316-65368815 Solanum lycopersicum
Solyc05g055920.2 0.5kb downstream 0.5kb downstream 2756 true SL2.50ch05: 65365560-65368315 Solanum lycopersicum
Solyc05g055920.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 65365560-65366059 Solanum lycopersicum
Solyc05g055920.2 1.0kb upstream 1.0kb upstream 3256 true SL2.50ch05: 65366060-65369315 Solanum lycopersicum
Solyc05g055920.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 65368316-65369315 Solanum lycopersicum
Solyc05g055920.2 1.0kb downstream 1.0kb downstream 3256 true SL2.50ch05: 65365060-65368315 Solanum lycopersicum
Solyc05g055920.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 65365060-65366059 Solanum lycopersicum
Solyc05g055920.2 2.0kb upstream 2.0kb upstream 4256 true SL2.50ch05: 65366060-65370315 Solanum lycopersicum
Solyc05g055920.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 65368316-65370315 Solanum lycopersicum
Solyc05g055920.2 2.0kb downstream 2.0kb downstream 4256 true SL2.50ch05: 65364060-65368315 Solanum lycopersicum
Solyc05g055920.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 65364060-65366059 Solanum lycopersicum
Solyc05g055920.2 5.0kb upstream 5.0kb upstream 7256 true SL2.50ch05: 65366060-65373315 Solanum lycopersicum
Solyc05g055920.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 65368316-65373315 Solanum lycopersicum
Solyc05g055920.2 5.0kb downstream 5.0kb downstream 7256 true SL2.50ch05: 65361060-65368315 Solanum lycopersicum
Solyc05g055920.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 65361060-65366059 Solanum lycopersicum
Solyc05g055920.2 10.0kb upstream 10.0kb upstream 12256 true SL2.50ch05: 65366060-65378315 Solanum lycopersicum
Solyc05g055920.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 65368316-65378315 Solanum lycopersicum
Solyc05g055920.2 10.0kb downstream 10.0kb downstream 12256 true SL2.50ch05: 65356060-65368315 Solanum lycopersicum
Solyc05g055920.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 65356060-65366059 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121413930 5263 Asterids View MSA
123752777 5271 Pentapetalae View MSA
122787694 5272 Eudicot View MSA
122048299 5273 Angiosperm View MSA
121351739 5274 Embryophyte View MSA
123427392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain