Gene : Solyc05g052960.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PF00651//PF00917 - BTB/POZ domain (BTB) // MATH domain (MATH) Description:  BTB/POZ domain containing protein expressed (AHRD V1 ***- Q10C73_ORYSJ); contains Interpro domain(s) IPR013089 Kelch related
Genomic Order:  2056 Name:  ? Solyc05g052960.2
Secondary Identifier:  ? PAC:36145599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g052960.2 0.5kb upstream 0.5kb upstream 6061 true SL2.50ch05: 63130596-63136656 Solanum lycopersicum
Solyc05g052960.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 63136157-63136656 Solanum lycopersicum
Solyc05g052960.2 0.5kb downstream 0.5kb downstream 6061 true SL2.50ch05: 63130096-63136156 Solanum lycopersicum
Solyc05g052960.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 63130096-63130595 Solanum lycopersicum
Solyc05g052960.2 1.0kb upstream 1.0kb upstream 6561 true SL2.50ch05: 63130596-63137156 Solanum lycopersicum
Solyc05g052960.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 63136157-63137156 Solanum lycopersicum
Solyc05g052960.2 1.0kb downstream 1.0kb downstream 6561 true SL2.50ch05: 63129596-63136156 Solanum lycopersicum
Solyc05g052960.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 63129596-63130595 Solanum lycopersicum
Solyc05g052960.2 2.0kb upstream 2.0kb upstream 7561 true SL2.50ch05: 63130596-63138156 Solanum lycopersicum
Solyc05g052960.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 63136157-63138156 Solanum lycopersicum
Solyc05g052960.2 2.0kb downstream 2.0kb downstream 7561 true SL2.50ch05: 63128596-63136156 Solanum lycopersicum
Solyc05g052960.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 63128596-63130595 Solanum lycopersicum
Solyc05g052960.2 5.0kb upstream 5.0kb upstream 10561 true SL2.50ch05: 63130596-63141156 Solanum lycopersicum
Solyc05g052960.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 63136157-63141156 Solanum lycopersicum
Solyc05g052960.2 5.0kb downstream 5.0kb downstream 10561 true SL2.50ch05: 63125596-63136156 Solanum lycopersicum
Solyc05g052960.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 63125596-63130595 Solanum lycopersicum
Solyc05g052960.2 10.0kb upstream 10.0kb upstream 15561 true SL2.50ch05: 63130596-63146156 Solanum lycopersicum
Solyc05g052960.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 63136157-63146156 Solanum lycopersicum
Solyc05g052960.2 10.0kb downstream 10.0kb downstream 15561 true SL2.50ch05: 63120596-63136156 Solanum lycopersicum
Solyc05g052960.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 63120596-63130595 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471365 5263 Asterids View MSA
123739002 5271 Pentapetalae View MSA
122796766 5272 Eudicot View MSA
122042496 5273 Angiosperm View MSA
121309979 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain