Gene : Solyc05g051790.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) Description:  DNA-directed RNA polymerase subunit H (AHRD V1 *-*- RPOH_METBU); contains Interpro domain(s) IPR014381 DNA-directed RNA polymerase, RPB5 subunit
Genomic Order:  1940 Name:  ? Solyc05g051790.2
Secondary Identifier:  ? PAC:36145968
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g051790.2 0.5kb upstream 0.5kb upstream 3455 true SL2.50ch05: 62169227-62172681 Solanum lycopersicum
Solyc05g051790.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 62169227-62169726 Solanum lycopersicum
Solyc05g051790.2 0.5kb downstream 0.5kb downstream 3455 true SL2.50ch05: 62169727-62173181 Solanum lycopersicum
Solyc05g051790.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 62172682-62173181 Solanum lycopersicum
Solyc05g051790.2 1.0kb upstream 1.0kb upstream 3955 true SL2.50ch05: 62168727-62172681 Solanum lycopersicum
Solyc05g051790.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 62168727-62169726 Solanum lycopersicum
Solyc05g051790.2 1.0kb downstream 1.0kb downstream 3955 true SL2.50ch05: 62169727-62173681 Solanum lycopersicum
Solyc05g051790.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 62172682-62173681 Solanum lycopersicum
Solyc05g051790.2 2.0kb upstream 2.0kb upstream 4955 true SL2.50ch05: 62167727-62172681 Solanum lycopersicum
Solyc05g051790.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 62167727-62169726 Solanum lycopersicum
Solyc05g051790.2 2.0kb downstream 2.0kb downstream 4955 true SL2.50ch05: 62169727-62174681 Solanum lycopersicum
Solyc05g051790.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 62172682-62174681 Solanum lycopersicum
Solyc05g051790.2 5.0kb upstream 5.0kb upstream 7955 true SL2.50ch05: 62164727-62172681 Solanum lycopersicum
Solyc05g051790.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 62164727-62169726 Solanum lycopersicum
Solyc05g051790.2 5.0kb downstream 5.0kb downstream 7955 true SL2.50ch05: 62169727-62177681 Solanum lycopersicum
Solyc05g051790.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 62172682-62177681 Solanum lycopersicum
Solyc05g051790.2 10.0kb upstream 10.0kb upstream 12955 true SL2.50ch05: 62159727-62172681 Solanum lycopersicum
Solyc05g051790.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 62159727-62169726 Solanum lycopersicum
Solyc05g051790.2 10.0kb downstream 10.0kb downstream 12955 true SL2.50ch05: 62169727-62182681 Solanum lycopersicum
Solyc05g051790.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 62172682-62182681 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467064 5263 Asterids View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain