Gene : Solyc05g054220.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB) Description:  5-AMP-activated protein kinase subunit beta-1 (AHRD V1 **** C1BJ92_OSMMO); contains Interpro domain(s) IPR006828 5-AMP-activated protein kinase, beta subunit, complex-interacting region
Genomic Order:  2181 Name:  ? Solyc05g054220.2
Secondary Identifier:  ? PAC:36144799
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g054220.2 0.5kb upstream 0.5kb upstream 6678 true SL2.50ch05: 64178402-64185079 Solanum lycopersicum
Solyc05g054220.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 64184580-64185079 Solanum lycopersicum
Solyc05g054220.2 0.5kb downstream 0.5kb downstream 6678 true SL2.50ch05: 64177902-64184579 Solanum lycopersicum
Solyc05g054220.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 64177902-64178401 Solanum lycopersicum
Solyc05g054220.2 1.0kb upstream 1.0kb upstream 7178 true SL2.50ch05: 64178402-64185579 Solanum lycopersicum
Solyc05g054220.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 64184580-64185579 Solanum lycopersicum
Solyc05g054220.2 1.0kb downstream 1.0kb downstream 7178 true SL2.50ch05: 64177402-64184579 Solanum lycopersicum
Solyc05g054220.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 64177402-64178401 Solanum lycopersicum
Solyc05g054220.2 2.0kb upstream 2.0kb upstream 8178 true SL2.50ch05: 64178402-64186579 Solanum lycopersicum
Solyc05g054220.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 64184580-64186579 Solanum lycopersicum
Solyc05g054220.2 2.0kb downstream 2.0kb downstream 8178 true SL2.50ch05: 64176402-64184579 Solanum lycopersicum
Solyc05g054220.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 64176402-64178401 Solanum lycopersicum
Solyc05g054220.2 5.0kb upstream 5.0kb upstream 11178 true SL2.50ch05: 64178402-64189579 Solanum lycopersicum
Solyc05g054220.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 64184580-64189579 Solanum lycopersicum
Solyc05g054220.2 5.0kb downstream 5.0kb downstream 11178 true SL2.50ch05: 64173402-64184579 Solanum lycopersicum
Solyc05g054220.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 64173402-64178401 Solanum lycopersicum
Solyc05g054220.2 10.0kb upstream 10.0kb upstream 16178 true SL2.50ch05: 64178402-64194579 Solanum lycopersicum
Solyc05g054220.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 64184580-64194579 Solanum lycopersicum
Solyc05g054220.2 10.0kb downstream 10.0kb downstream 16178 true SL2.50ch05: 64168402-64184579 Solanum lycopersicum
Solyc05g054220.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 64168402-64178401 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477291 5263 Asterids View MSA
123740870 5271 Pentapetalae View MSA
122792277 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain