Gene : Solyc05g054490.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 1.3.1.8 - Acyl-CoA dehydrogenase (NADP(+)) / Enoyl coenzyme A reductase Description:  Trans-2-enoyl-CoA reductase (AHRD V1 **-* A9XUG8_GOSHI); contains Interpro domain(s) IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
Genomic Order:  2208 Name:  ? Solyc05g054490.2
Secondary Identifier:  ? PAC:36145427
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5080 Solanum lycopersicum pathologic  
Slycopersicum PWY-6433 Solanum lycopersicum pathologic  
Slycopersicum PWY-6598 Solanum lycopersicum pathologic  
Slycopersicum PWY-7036 Solanum lycopersicum pathologic  
Slycopersicum PWY-7601 Solanum lycopersicum pathologic  
Slycopersicum PWY-7606 Solanum lycopersicum pathologic  
Slycopersicum PWY-7619 Solanum lycopersicum pathologic  
Slycopersicum PWY-7726 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g054490.2 0.5kb upstream 0.5kb upstream 5505 true SL2.50ch05: 64407803-64413307 Solanum lycopersicum
Solyc05g054490.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 64412808-64413307 Solanum lycopersicum
Solyc05g054490.2 0.5kb downstream 0.5kb downstream 5505 true SL2.50ch05: 64407303-64412807 Solanum lycopersicum
Solyc05g054490.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 64407303-64407802 Solanum lycopersicum
Solyc05g054490.2 1.0kb upstream 1.0kb upstream 6005 true SL2.50ch05: 64407803-64413807 Solanum lycopersicum
Solyc05g054490.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 64412808-64413807 Solanum lycopersicum
Solyc05g054490.2 1.0kb downstream 1.0kb downstream 6005 true SL2.50ch05: 64406803-64412807 Solanum lycopersicum
Solyc05g054490.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 64406803-64407802 Solanum lycopersicum
Solyc05g054490.2 2.0kb upstream 2.0kb upstream 7005 true SL2.50ch05: 64407803-64414807 Solanum lycopersicum
Solyc05g054490.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 64412808-64414807 Solanum lycopersicum
Solyc05g054490.2 2.0kb downstream 2.0kb downstream 7005 true SL2.50ch05: 64405803-64412807 Solanum lycopersicum
Solyc05g054490.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 64405803-64407802 Solanum lycopersicum
Solyc05g054490.2 5.0kb upstream 5.0kb upstream 10005 true SL2.50ch05: 64407803-64417807 Solanum lycopersicum
Solyc05g054490.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 64412808-64417807 Solanum lycopersicum
Solyc05g054490.2 5.0kb downstream 5.0kb downstream 10005 true SL2.50ch05: 64402803-64412807 Solanum lycopersicum
Solyc05g054490.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 64402803-64407802 Solanum lycopersicum
Solyc05g054490.2 10.0kb upstream 10.0kb upstream 15005 true SL2.50ch05: 64407803-64422807 Solanum lycopersicum
Solyc05g054490.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 64412808-64422807 Solanum lycopersicum
Solyc05g054490.2 10.0kb downstream 10.0kb downstream 15005 true SL2.50ch05: 64397803-64412807 Solanum lycopersicum
Solyc05g054490.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 64397803-64407802 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470232 5263 Asterids View MSA
123738420 5271 Pentapetalae View MSA
122787535 5272 Eudicot View MSA
122041851 5273 Angiosperm View MSA
121344061 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain