Gene : Solyc01g089850.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR15615:SF28 - CYCLIN-U4-1 Description:  Cyclin-dependent protein kinase regulator Pho80 (AHRD V1 **** B6QI37_PENMQ); contains Interpro domain(s) IPR012389 Negative regulatory factor PREG
Genomic Order:  2340 Name:  ? Solyc01g089850.2
Secondary Identifier:  ? PAC:36138244
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g089850.2 0.5kb upstream 0.5kb upstream 2928 true SL2.50ch01: 83576960-83579887 Solanum lycopersicum
Solyc01g089850.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 83579388-83579887 Solanum lycopersicum
Solyc01g089850.2 0.5kb downstream 0.5kb downstream 2928 true SL2.50ch01: 83576460-83579387 Solanum lycopersicum
Solyc01g089850.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 83576460-83576959 Solanum lycopersicum
Solyc01g089850.2 1.0kb upstream 1.0kb upstream 3428 true SL2.50ch01: 83576960-83580387 Solanum lycopersicum
Solyc01g089850.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 83579388-83580387 Solanum lycopersicum
Solyc01g089850.2 1.0kb downstream 1.0kb downstream 3428 true SL2.50ch01: 83575960-83579387 Solanum lycopersicum
Solyc01g089850.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 83575960-83576959 Solanum lycopersicum
Solyc01g089850.2 2.0kb upstream 2.0kb upstream 4428 true SL2.50ch01: 83576960-83581387 Solanum lycopersicum
Solyc01g089850.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 83579388-83581387 Solanum lycopersicum
Solyc01g089850.2 2.0kb downstream 2.0kb downstream 4428 true SL2.50ch01: 83574960-83579387 Solanum lycopersicum
Solyc01g089850.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 83574960-83576959 Solanum lycopersicum
Solyc01g089850.2 5.0kb upstream 5.0kb upstream 7428 true SL2.50ch01: 83576960-83584387 Solanum lycopersicum
Solyc01g089850.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 83579388-83584387 Solanum lycopersicum
Solyc01g089850.2 5.0kb downstream 5.0kb downstream 7428 true SL2.50ch01: 83571960-83579387 Solanum lycopersicum
Solyc01g089850.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 83571960-83576959 Solanum lycopersicum
Solyc01g089850.2 10.0kb upstream 10.0kb upstream 12428 true SL2.50ch01: 83576960-83589387 Solanum lycopersicum
Solyc01g089850.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 83579388-83589387 Solanum lycopersicum
Solyc01g089850.2 10.0kb downstream 10.0kb downstream 12428 true SL2.50ch01: 83566960-83579387 Solanum lycopersicum
Solyc01g089850.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 83566960-83576959 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471030 5263 Asterids View MSA
123743073 5271 Pentapetalae View MSA
122792546 5272 Eudicot View MSA
122043012 5273 Angiosperm View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain