Gene : Solyc05g053160.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR33294:SF5 - AWPM-19-LIKE FAMILY PROTEIN Description:  Plasma membrane associated protein (AHRD V1 ***- B6SJ93_MAIZE); contains Interpro domain(s) IPR008390 AWPM-19-like
Genomic Order:  2076 Name:  ? Solyc05g053160.2
Secondary Identifier:  ? PAC:36145241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g053160.2 0.5kb upstream 0.5kb upstream 2450 true SL2.50ch05: 63291994-63294443 Solanum lycopersicum
Solyc05g053160.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 63293944-63294443 Solanum lycopersicum
Solyc05g053160.2 0.5kb downstream 0.5kb downstream 2450 true SL2.50ch05: 63291494-63293943 Solanum lycopersicum
Solyc05g053160.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 63291494-63291993 Solanum lycopersicum
Solyc05g053160.2 1.0kb upstream 1.0kb upstream 2950 true SL2.50ch05: 63291994-63294943 Solanum lycopersicum
Solyc05g053160.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 63293944-63294943 Solanum lycopersicum
Solyc05g053160.2 1.0kb downstream 1.0kb downstream 2950 true SL2.50ch05: 63290994-63293943 Solanum lycopersicum
Solyc05g053160.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 63290994-63291993 Solanum lycopersicum
Solyc05g053160.2 2.0kb upstream 2.0kb upstream 3950 true SL2.50ch05: 63291994-63295943 Solanum lycopersicum
Solyc05g053160.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 63293944-63295943 Solanum lycopersicum
Solyc05g053160.2 2.0kb downstream 2.0kb downstream 3950 true SL2.50ch05: 63289994-63293943 Solanum lycopersicum
Solyc05g053160.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 63289994-63291993 Solanum lycopersicum
Solyc05g053160.2 5.0kb upstream 5.0kb upstream 6950 true SL2.50ch05: 63291994-63298943 Solanum lycopersicum
Solyc05g053160.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 63293944-63298943 Solanum lycopersicum
Solyc05g053160.2 5.0kb downstream 5.0kb downstream 6950 true SL2.50ch05: 63286994-63293943 Solanum lycopersicum
Solyc05g053160.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 63286994-63291993 Solanum lycopersicum
Solyc05g053160.2 10.0kb upstream 10.0kb upstream 11950 true SL2.50ch05: 63291994-63303943 Solanum lycopersicum
Solyc05g053160.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 63293944-63303943 Solanum lycopersicum
Solyc05g053160.2 10.0kb downstream 10.0kb downstream 11950 true SL2.50ch05: 63281994-63293943 Solanum lycopersicum
Solyc05g053160.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 63281994-63291993 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479746 5263 Asterids View MSA
123736675 5271 Pentapetalae View MSA
122790401 5272 Eudicot View MSA
122044376 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain