Gene : Solyc05g053660.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11514:SF61 - TRANSCRIPTION FACTOR FAMA Description:  BHLH transcription factor (AHRD V1 *-** Q401N4_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Genomic Order:  2126 Name:  ? Solyc05g053660.1
Secondary Identifier:  ? PAC:36145536
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g053660.1 0.5kb upstream 0.5kb upstream 2843 true SL2.50ch05: 63721021-63723863 Solanum lycopersicum
Solyc05g053660.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 63721021-63721520 Solanum lycopersicum
Solyc05g053660.1 0.5kb downstream 0.5kb downstream 2843 true SL2.50ch05: 63721521-63724363 Solanum lycopersicum
Solyc05g053660.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 63723864-63724363 Solanum lycopersicum
Solyc05g053660.1 1.0kb upstream 1.0kb upstream 3343 true SL2.50ch05: 63720521-63723863 Solanum lycopersicum
Solyc05g053660.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 63720521-63721520 Solanum lycopersicum
Solyc05g053660.1 1.0kb downstream 1.0kb downstream 3343 true SL2.50ch05: 63721521-63724863 Solanum lycopersicum
Solyc05g053660.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 63723864-63724863 Solanum lycopersicum
Solyc05g053660.1 2.0kb upstream 2.0kb upstream 4343 true SL2.50ch05: 63719521-63723863 Solanum lycopersicum
Solyc05g053660.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 63719521-63721520 Solanum lycopersicum
Solyc05g053660.1 2.0kb downstream 2.0kb downstream 4343 true SL2.50ch05: 63721521-63725863 Solanum lycopersicum
Solyc05g053660.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 63723864-63725863 Solanum lycopersicum
Solyc05g053660.1 5.0kb upstream 5.0kb upstream 7343 true SL2.50ch05: 63716521-63723863 Solanum lycopersicum
Solyc05g053660.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 63716521-63721520 Solanum lycopersicum
Solyc05g053660.1 5.0kb downstream 5.0kb downstream 7343 true SL2.50ch05: 63721521-63728863 Solanum lycopersicum
Solyc05g053660.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 63723864-63728863 Solanum lycopersicum
Solyc05g053660.1 10.0kb upstream 10.0kb upstream 12343 true SL2.50ch05: 63711521-63723863 Solanum lycopersicum
Solyc05g053660.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 63711521-63721520 Solanum lycopersicum
Solyc05g053660.1 10.0kb downstream 10.0kb downstream 12343 true SL2.50ch05: 63721521-63733863 Solanum lycopersicum
Solyc05g053660.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 63723864-63733863 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478742 5263 Asterids View MSA
123749503 5271 Pentapetalae View MSA
122789750 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain