Gene : Solyc05g045780.1 S. lycopersicum ITAG2.4
Defline:  (1 of 9) PTHR12220:SF15 - 60S RIBOSOMAL PROTEIN L16, MITOCHONDRIAL Description:  50S ribosomal protein L16 (AHRD V1 ***- D7A960_STAND); contains Interpro domain(s) IPR000114 Ribosomal protein L16
Genomic Order:  1640 Name:  ? Solyc05g045780.1
Secondary Identifier:  ? PAC:36144398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g045780.1 0.5kb upstream 0.5kb upstream 1730 true SL2.50ch05: 57579463-57581192 Solanum lycopersicum
Solyc05g045780.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 57579463-57579962 Solanum lycopersicum
Solyc05g045780.1 0.5kb downstream 0.5kb downstream 1730 true SL2.50ch05: 57579963-57581692 Solanum lycopersicum
Solyc05g045780.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 57581193-57581692 Solanum lycopersicum
Solyc05g045780.1 1.0kb upstream 1.0kb upstream 2230 true SL2.50ch05: 57578963-57581192 Solanum lycopersicum
Solyc05g045780.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 57578963-57579962 Solanum lycopersicum
Solyc05g045780.1 1.0kb downstream 1.0kb downstream 2230 true SL2.50ch05: 57579963-57582192 Solanum lycopersicum
Solyc05g045780.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 57581193-57582192 Solanum lycopersicum
Solyc05g045780.1 2.0kb upstream 2.0kb upstream 3230 true SL2.50ch05: 57577963-57581192 Solanum lycopersicum
Solyc05g045780.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 57577963-57579962 Solanum lycopersicum
Solyc05g045780.1 2.0kb downstream 2.0kb downstream 3230 true SL2.50ch05: 57579963-57583192 Solanum lycopersicum
Solyc05g045780.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 57581193-57583192 Solanum lycopersicum
Solyc05g045780.1 5.0kb upstream 5.0kb upstream 6230 true SL2.50ch05: 57574963-57581192 Solanum lycopersicum
Solyc05g045780.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 57574963-57579962 Solanum lycopersicum
Solyc05g045780.1 5.0kb downstream 5.0kb downstream 6230 true SL2.50ch05: 57579963-57586192 Solanum lycopersicum
Solyc05g045780.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 57581193-57586192 Solanum lycopersicum
Solyc05g045780.1 10.0kb upstream 10.0kb upstream 11230 true SL2.50ch05: 57569963-57581192 Solanum lycopersicum
Solyc05g045780.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 57569963-57579962 Solanum lycopersicum
Solyc05g045780.1 10.0kb downstream 10.0kb downstream 11230 true SL2.50ch05: 57579963-57591192 Solanum lycopersicum
Solyc05g045780.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 57581193-57591192 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482858 5263 Asterids View MSA
123746840 5271 Pentapetalae View MSA
122794950 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain