Gene : Solyc01g088310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Description:  Geranylgeranyl reductase (AHRD V1 ***- Q09JZ1_BRARP); contains Interpro domain(s) IPR011774 Geranylgeranyl reductase, plants and cyanobacteria
Genomic Order:  2285 Name:  ? Solyc01g088310.2
Secondary Identifier:  ? PAC:36138310
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5063 Solanum lycopersicum pathologic  
Slycopersicum PWY-5064 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g088310.2 0.5kb upstream 0.5kb upstream 2094 true SL2.50ch01: 83082961-83085054 Solanum lycopersicum
Solyc01g088310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 83082961-83083460 Solanum lycopersicum
Solyc01g088310.2 0.5kb downstream 0.5kb downstream 2094 true SL2.50ch01: 83083461-83085554 Solanum lycopersicum
Solyc01g088310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 83085055-83085554 Solanum lycopersicum
Solyc01g088310.2 1.0kb upstream 1.0kb upstream 2594 true SL2.50ch01: 83082461-83085054 Solanum lycopersicum
Solyc01g088310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 83082461-83083460 Solanum lycopersicum
Solyc01g088310.2 1.0kb downstream 1.0kb downstream 2594 true SL2.50ch01: 83083461-83086054 Solanum lycopersicum
Solyc01g088310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 83085055-83086054 Solanum lycopersicum
Solyc01g088310.2 2.0kb upstream 2.0kb upstream 3594 true SL2.50ch01: 83081461-83085054 Solanum lycopersicum
Solyc01g088310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 83081461-83083460 Solanum lycopersicum
Solyc01g088310.2 2.0kb downstream 2.0kb downstream 3594 true SL2.50ch01: 83083461-83087054 Solanum lycopersicum
Solyc01g088310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 83085055-83087054 Solanum lycopersicum
Solyc01g088310.2 5.0kb upstream 5.0kb upstream 6594 true SL2.50ch01: 83078461-83085054 Solanum lycopersicum
Solyc01g088310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 83078461-83083460 Solanum lycopersicum
Solyc01g088310.2 5.0kb downstream 5.0kb downstream 6594 true SL2.50ch01: 83083461-83090054 Solanum lycopersicum
Solyc01g088310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 83085055-83090054 Solanum lycopersicum
Solyc01g088310.2 10.0kb upstream 10.0kb upstream 11594 true SL2.50ch01: 83073461-83085054 Solanum lycopersicum
Solyc01g088310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 83073461-83083460 Solanum lycopersicum
Solyc01g088310.2 10.0kb downstream 10.0kb downstream 11594 true SL2.50ch01: 83083461-83095054 Solanum lycopersicum
Solyc01g088310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 83085055-83095054 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472393 5263 Asterids View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain