Gene : Solyc01g095690.2 S. lycopersicum ITAG2.4
Defline:  (1 of 67) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KIA6_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  2723 Name:  ? Solyc01g095690.2
Secondary Identifier:  ? PAC:36138215
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g095690.2 0.5kb upstream 0.5kb upstream 3471 true SL2.50ch01: 86878821-86882291 Solanum lycopersicum
Solyc01g095690.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 86878821-86879320 Solanum lycopersicum
Solyc01g095690.2 0.5kb downstream 0.5kb downstream 3471 true SL2.50ch01: 86879321-86882791 Solanum lycopersicum
Solyc01g095690.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 86882292-86882791 Solanum lycopersicum
Solyc01g095690.2 1.0kb upstream 1.0kb upstream 3971 true SL2.50ch01: 86878321-86882291 Solanum lycopersicum
Solyc01g095690.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 86878321-86879320 Solanum lycopersicum
Solyc01g095690.2 1.0kb downstream 1.0kb downstream 3971 true SL2.50ch01: 86879321-86883291 Solanum lycopersicum
Solyc01g095690.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 86882292-86883291 Solanum lycopersicum
Solyc01g095690.2 2.0kb upstream 2.0kb upstream 4971 true SL2.50ch01: 86877321-86882291 Solanum lycopersicum
Solyc01g095690.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 86877321-86879320 Solanum lycopersicum
Solyc01g095690.2 2.0kb downstream 2.0kb downstream 4971 true SL2.50ch01: 86879321-86884291 Solanum lycopersicum
Solyc01g095690.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 86882292-86884291 Solanum lycopersicum
Solyc01g095690.2 5.0kb upstream 5.0kb upstream 7971 true SL2.50ch01: 86874321-86882291 Solanum lycopersicum
Solyc01g095690.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 86874321-86879320 Solanum lycopersicum
Solyc01g095690.2 5.0kb downstream 5.0kb downstream 7971 true SL2.50ch01: 86879321-86887291 Solanum lycopersicum
Solyc01g095690.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 86882292-86887291 Solanum lycopersicum
Solyc01g095690.2 10.0kb upstream 10.0kb upstream 12971 true SL2.50ch01: 86869321-86882291 Solanum lycopersicum
Solyc01g095690.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 86869321-86879320 Solanum lycopersicum
Solyc01g095690.2 10.0kb downstream 10.0kb downstream 12971 true SL2.50ch01: 86879321-86892291 Solanum lycopersicum
Solyc01g095690.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 86882292-86892291 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414120 5263 Asterids View MSA
123740477 5271 Pentapetalae View MSA
122791642 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain