Gene : Solyc02g071980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR15629//PTHR15629:SF9 - SH3YL1 PROTEIN // SUBFAMILY NOT NAMED Description:  Actin-binding protein involved in bundling of actin filaments and endocytosis of actin cortical patches activity stimulated by Las17p contains SH3 domain similar to Rvs167p (AHRD V1 *--* D3DKW1_YEAST); contains Interpro domain(s) IPR007461 Ysc84 actin-binding domain
Genomic Order:  1478 Name:  ? Solyc02g071980.2
Secondary Identifier:  ? PAC:36158429
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g071980.2 0.5kb upstream 0.5kb upstream 5905 true SL2.50ch02: 41306758-41312662 Solanum lycopersicum
Solyc02g071980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 41306758-41307257 Solanum lycopersicum
Solyc02g071980.2 0.5kb downstream 0.5kb downstream 5905 true SL2.50ch02: 41307258-41313162 Solanum lycopersicum
Solyc02g071980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 41312663-41313162 Solanum lycopersicum
Solyc02g071980.2 1.0kb upstream 1.0kb upstream 6405 true SL2.50ch02: 41306258-41312662 Solanum lycopersicum
Solyc02g071980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 41306258-41307257 Solanum lycopersicum
Solyc02g071980.2 1.0kb downstream 1.0kb downstream 6405 true SL2.50ch02: 41307258-41313662 Solanum lycopersicum
Solyc02g071980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 41312663-41313662 Solanum lycopersicum
Solyc02g071980.2 2.0kb upstream 2.0kb upstream 7405 true SL2.50ch02: 41305258-41312662 Solanum lycopersicum
Solyc02g071980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 41305258-41307257 Solanum lycopersicum
Solyc02g071980.2 2.0kb downstream 2.0kb downstream 7405 true SL2.50ch02: 41307258-41314662 Solanum lycopersicum
Solyc02g071980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 41312663-41314662 Solanum lycopersicum
Solyc02g071980.2 5.0kb upstream 5.0kb upstream 10405 true SL2.50ch02: 41302258-41312662 Solanum lycopersicum
Solyc02g071980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 41302258-41307257 Solanum lycopersicum
Solyc02g071980.2 5.0kb downstream 5.0kb downstream 10405 true SL2.50ch02: 41307258-41317662 Solanum lycopersicum
Solyc02g071980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 41312663-41317662 Solanum lycopersicum
Solyc02g071980.2 10.0kb upstream 10.0kb upstream 15405 true SL2.50ch02: 41297258-41312662 Solanum lycopersicum
Solyc02g071980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 41297258-41307257 Solanum lycopersicum
Solyc02g071980.2 10.0kb downstream 10.0kb downstream 15405 true SL2.50ch02: 41307258-41322662 Solanum lycopersicum
Solyc02g071980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 41312663-41322662 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480622 5263 Asterids View MSA
123736905 5271 Pentapetalae View MSA
122785686 5272 Eudicot View MSA
122047876 5273 Angiosperm View MSA
121349418 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain