Gene : Solyc02g076750.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR12411:SF371 - CATHEPSIN O Description:  Cathepsin B-like cysteine proteinase (AHRD V1 **-* CYSP_SCHMA); contains Interpro domain(s) IPR013128 Peptidase C1A, papain
Genomic Order:  1557 Name:  ? Solyc02g076750.1
Secondary Identifier:  ? PAC:36159477
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g076750.1 0.5kb upstream 0.5kb upstream 2700 true SL2.50ch02: 41856975-41859674 Solanum lycopersicum
Solyc02g076750.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 41859175-41859674 Solanum lycopersicum
Solyc02g076750.1 0.5kb downstream 0.5kb downstream 2700 true SL2.50ch02: 41856475-41859174 Solanum lycopersicum
Solyc02g076750.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 41856475-41856974 Solanum lycopersicum
Solyc02g076750.1 1.0kb upstream 1.0kb upstream 3200 true SL2.50ch02: 41856975-41860174 Solanum lycopersicum
Solyc02g076750.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 41859175-41860174 Solanum lycopersicum
Solyc02g076750.1 1.0kb downstream 1.0kb downstream 3200 true SL2.50ch02: 41855975-41859174 Solanum lycopersicum
Solyc02g076750.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 41855975-41856974 Solanum lycopersicum
Solyc02g076750.1 2.0kb upstream 2.0kb upstream 4200 true SL2.50ch02: 41856975-41861174 Solanum lycopersicum
Solyc02g076750.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 41859175-41861174 Solanum lycopersicum
Solyc02g076750.1 2.0kb downstream 2.0kb downstream 4200 true SL2.50ch02: 41854975-41859174 Solanum lycopersicum
Solyc02g076750.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 41854975-41856974 Solanum lycopersicum
Solyc02g076750.1 5.0kb upstream 5.0kb upstream 7200 true SL2.50ch02: 41856975-41864174 Solanum lycopersicum
Solyc02g076750.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 41859175-41864174 Solanum lycopersicum
Solyc02g076750.1 5.0kb downstream 5.0kb downstream 7200 true SL2.50ch02: 41851975-41859174 Solanum lycopersicum
Solyc02g076750.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 41851975-41856974 Solanum lycopersicum
Solyc02g076750.1 10.0kb upstream 10.0kb upstream 12200 true SL2.50ch02: 41856975-41869174 Solanum lycopersicum
Solyc02g076750.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 41859175-41869174 Solanum lycopersicum
Solyc02g076750.1 10.0kb downstream 10.0kb downstream 12200 true SL2.50ch02: 41846975-41859174 Solanum lycopersicum
Solyc02g076750.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 41846975-41856974 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780807 5273 Angiosperm View MSA
121389723 5263 Asterids View MSA
123747945 5271 Pentapetalae View MSA
122772367 5272 Eudicot View MSA
121052407 5274 Embryophyte View MSA
123092456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain