Gene : Solyc02g077680.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11468:SF3 - GLYCOGEN PHOSPHORYLASE Description:  Phosphorylase (AHRD V1 **** B9H2Q8_POPTR); contains Interpro domain(s) IPR011833 Glycogen/starch/alpha-glucan phosphorylase
Genomic Order:  1650 Name:  ? Solyc02g077680.2
Secondary Identifier:  ? PAC:36158355
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7238 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g077680.2 0.5kb upstream 0.5kb upstream 13233 true SL2.50ch02: 42566604-42579836 Solanum lycopersicum
Solyc02g077680.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 42566604-42567103 Solanum lycopersicum
Solyc02g077680.2 0.5kb downstream 0.5kb downstream 13233 true SL2.50ch02: 42567104-42580336 Solanum lycopersicum
Solyc02g077680.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 42579837-42580336 Solanum lycopersicum
Solyc02g077680.2 1.0kb upstream 1.0kb upstream 13733 true SL2.50ch02: 42566104-42579836 Solanum lycopersicum
Solyc02g077680.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 42566104-42567103 Solanum lycopersicum
Solyc02g077680.2 1.0kb downstream 1.0kb downstream 13733 true SL2.50ch02: 42567104-42580836 Solanum lycopersicum
Solyc02g077680.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 42579837-42580836 Solanum lycopersicum
Solyc02g077680.2 2.0kb upstream 2.0kb upstream 14733 true SL2.50ch02: 42565104-42579836 Solanum lycopersicum
Solyc02g077680.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 42565104-42567103 Solanum lycopersicum
Solyc02g077680.2 2.0kb downstream 2.0kb downstream 14733 true SL2.50ch02: 42567104-42581836 Solanum lycopersicum
Solyc02g077680.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 42579837-42581836 Solanum lycopersicum
Solyc02g077680.2 5.0kb upstream 5.0kb upstream 17733 true SL2.50ch02: 42562104-42579836 Solanum lycopersicum
Solyc02g077680.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 42562104-42567103 Solanum lycopersicum
Solyc02g077680.2 5.0kb downstream 5.0kb downstream 17733 true SL2.50ch02: 42567104-42584836 Solanum lycopersicum
Solyc02g077680.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 42579837-42584836 Solanum lycopersicum
Solyc02g077680.2 10.0kb upstream 10.0kb upstream 22733 true SL2.50ch02: 42557104-42579836 Solanum lycopersicum
Solyc02g077680.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 42557104-42567103 Solanum lycopersicum
Solyc02g077680.2 10.0kb downstream 10.0kb downstream 22733 true SL2.50ch02: 42567104-42589836 Solanum lycopersicum
Solyc02g077680.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 42579837-42589836 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469232 5263 Asterids View MSA
123742386 5271 Pentapetalae View MSA
122770279 5272 Eudicot View MSA
122048524 5273 Angiosperm View MSA
121348195 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain