Gene : Solyc02g077660.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Description:  Homeobox protein EgHBX4 (Fragment) (AHRD V1 *--- HBX4_ECHGR); contains Interpro domain(s) IPR018500 DDT subgroup
Genomic Order:  1648 Name:  ? Solyc02g077660.2
Secondary Identifier:  ? PAC:36158598
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g077660.2 0.5kb upstream 0.5kb upstream 13071 true SL2.50ch02: 42546023-42559093 Solanum lycopersicum
Solyc02g077660.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 42546023-42546522 Solanum lycopersicum
Solyc02g077660.2 0.5kb downstream 0.5kb downstream 13071 true SL2.50ch02: 42546523-42559593 Solanum lycopersicum
Solyc02g077660.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 42559094-42559593 Solanum lycopersicum
Solyc02g077660.2 1.0kb upstream 1.0kb upstream 13571 true SL2.50ch02: 42545523-42559093 Solanum lycopersicum
Solyc02g077660.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 42545523-42546522 Solanum lycopersicum
Solyc02g077660.2 1.0kb downstream 1.0kb downstream 13571 true SL2.50ch02: 42546523-42560093 Solanum lycopersicum
Solyc02g077660.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 42559094-42560093 Solanum lycopersicum
Solyc02g077660.2 2.0kb upstream 2.0kb upstream 14571 true SL2.50ch02: 42544523-42559093 Solanum lycopersicum
Solyc02g077660.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 42544523-42546522 Solanum lycopersicum
Solyc02g077660.2 2.0kb downstream 2.0kb downstream 14571 true SL2.50ch02: 42546523-42561093 Solanum lycopersicum
Solyc02g077660.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 42559094-42561093 Solanum lycopersicum
Solyc02g077660.2 5.0kb upstream 5.0kb upstream 17571 true SL2.50ch02: 42541523-42559093 Solanum lycopersicum
Solyc02g077660.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 42541523-42546522 Solanum lycopersicum
Solyc02g077660.2 5.0kb downstream 5.0kb downstream 17571 true SL2.50ch02: 42546523-42564093 Solanum lycopersicum
Solyc02g077660.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 42559094-42564093 Solanum lycopersicum
Solyc02g077660.2 10.0kb upstream 10.0kb upstream 22571 true SL2.50ch02: 42536523-42559093 Solanum lycopersicum
Solyc02g077660.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 42536523-42546522 Solanum lycopersicum
Solyc02g077660.2 10.0kb downstream 10.0kb downstream 22571 true SL2.50ch02: 42546523-42569093 Solanum lycopersicum
Solyc02g077660.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 42559094-42569093 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474338 5263 Asterids View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain