Gene : Solyc02g069650.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) Description:  Vacuolar sorting-associated protein (AHRD V1 *-*- C0NTA8_AJECG); contains Interpro domain(s) IPR012501 Vps54-like
Genomic Order:  1245 Name:  ? Solyc02g069650.1
Secondary Identifier:  ? PAC:36158024
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g069650.1 0.5kb upstream 0.5kb upstream 20549 true SL2.50ch02: 39483211-39503759 Solanum lycopersicum
Solyc02g069650.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 39503260-39503759 Solanum lycopersicum
Solyc02g069650.1 0.5kb downstream 0.5kb downstream 20549 true SL2.50ch02: 39482711-39503259 Solanum lycopersicum
Solyc02g069650.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 39482711-39483210 Solanum lycopersicum
Solyc02g069650.1 1.0kb upstream 1.0kb upstream 21049 true SL2.50ch02: 39483211-39504259 Solanum lycopersicum
Solyc02g069650.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 39503260-39504259 Solanum lycopersicum
Solyc02g069650.1 1.0kb downstream 1.0kb downstream 21049 true SL2.50ch02: 39482211-39503259 Solanum lycopersicum
Solyc02g069650.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 39482211-39483210 Solanum lycopersicum
Solyc02g069650.1 2.0kb upstream 2.0kb upstream 22049 true SL2.50ch02: 39483211-39505259 Solanum lycopersicum
Solyc02g069650.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 39503260-39505259 Solanum lycopersicum
Solyc02g069650.1 2.0kb downstream 2.0kb downstream 22049 true SL2.50ch02: 39481211-39503259 Solanum lycopersicum
Solyc02g069650.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 39481211-39483210 Solanum lycopersicum
Solyc02g069650.1 5.0kb upstream 5.0kb upstream 25049 true SL2.50ch02: 39483211-39508259 Solanum lycopersicum
Solyc02g069650.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 39503260-39508259 Solanum lycopersicum
Solyc02g069650.1 5.0kb downstream 5.0kb downstream 25049 true SL2.50ch02: 39478211-39503259 Solanum lycopersicum
Solyc02g069650.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 39478211-39483210 Solanum lycopersicum
Solyc02g069650.1 10.0kb upstream 10.0kb upstream 30049 true SL2.50ch02: 39483211-39513259 Solanum lycopersicum
Solyc02g069650.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 39503260-39513259 Solanum lycopersicum
Solyc02g069650.1 10.0kb downstream 10.0kb downstream 30049 true SL2.50ch02: 39473211-39503259 Solanum lycopersicum
Solyc02g069650.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 39473211-39483210 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477020 5263 Asterids View MSA
123740237 5271 Pentapetalae View MSA
122788545 5272 Eudicot View MSA
122042289 5273 Angiosperm View MSA
121346645 5274 Embryophyte View MSA
123425367 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain