Gene : Solyc02g062560.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF06792 - Uncharacterised protein family (UPF0261) (UPF0261) Description:  TIM-barrel enzyme family protein (AHRD V1 *--- C5JTT1_AJEDS); contains Interpro domain(s) IPR008322 Uncharacterised conserved protein UCP033271 IPR009215 TIM-barrel signal transduction protein, predicted IPR018087 Glycoside hydrolase, family 5, conserved site
Genomic Order:  737 Name:  ? Solyc02g062560.2
Secondary Identifier:  ? PAC:36157367
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g062560.2 0.5kb upstream 0.5kb upstream 8537 true SL2.50ch02: 34278151-34286687 Solanum lycopersicum
Solyc02g062560.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 34286188-34286687 Solanum lycopersicum
Solyc02g062560.2 0.5kb downstream 0.5kb downstream 8537 true SL2.50ch02: 34277651-34286187 Solanum lycopersicum
Solyc02g062560.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 34277651-34278150 Solanum lycopersicum
Solyc02g062560.2 1.0kb upstream 1.0kb upstream 9037 true SL2.50ch02: 34278151-34287187 Solanum lycopersicum
Solyc02g062560.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 34286188-34287187 Solanum lycopersicum
Solyc02g062560.2 1.0kb downstream 1.0kb downstream 9037 true SL2.50ch02: 34277151-34286187 Solanum lycopersicum
Solyc02g062560.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 34277151-34278150 Solanum lycopersicum
Solyc02g062560.2 2.0kb upstream 2.0kb upstream 10037 true SL2.50ch02: 34278151-34288187 Solanum lycopersicum
Solyc02g062560.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 34286188-34288187 Solanum lycopersicum
Solyc02g062560.2 2.0kb downstream 2.0kb downstream 10037 true SL2.50ch02: 34276151-34286187 Solanum lycopersicum
Solyc02g062560.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 34276151-34278150 Solanum lycopersicum
Solyc02g062560.2 5.0kb upstream 5.0kb upstream 13037 true SL2.50ch02: 34278151-34291187 Solanum lycopersicum
Solyc02g062560.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 34286188-34291187 Solanum lycopersicum
Solyc02g062560.2 5.0kb downstream 5.0kb downstream 13037 true SL2.50ch02: 34273151-34286187 Solanum lycopersicum
Solyc02g062560.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 34273151-34278150 Solanum lycopersicum
Solyc02g062560.2 10.0kb upstream 10.0kb upstream 18037 true SL2.50ch02: 34278151-34296187 Solanum lycopersicum
Solyc02g062560.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 34286188-34296187 Solanum lycopersicum
Solyc02g062560.2 10.0kb downstream 10.0kb downstream 18037 true SL2.50ch02: 34268151-34286187 Solanum lycopersicum
Solyc02g062560.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 34268151-34278150 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473780 5263 Asterids View MSA
123740666 5271 Pentapetalae View MSA
122788175 5272 Eudicot View MSA
122044377 5273 Angiosperm View MSA
121345616 5274 Embryophyte View MSA
123380245 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain