Gene : Solyc02g091690.2 S. lycopersicum ITAG2.4
Defline:  (1 of 140) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Description:  BHLH transcription factor (AHRD V1 **-* A9YWR2_MEDTR); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Genomic Order:  3041 Name:  ? Solyc02g091690.2
Secondary Identifier:  ? PAC:36157468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g091690.2 0.5kb upstream 0.5kb upstream 2122 true SL2.50ch02: 52926828-52928949 Solanum lycopersicum
Solyc02g091690.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 52926828-52927327 Solanum lycopersicum
Solyc02g091690.2 0.5kb downstream 0.5kb downstream 2122 true SL2.50ch02: 52927328-52929449 Solanum lycopersicum
Solyc02g091690.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 52928950-52929449 Solanum lycopersicum
Solyc02g091690.2 1.0kb upstream 1.0kb upstream 2622 true SL2.50ch02: 52926328-52928949 Solanum lycopersicum
Solyc02g091690.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 52926328-52927327 Solanum lycopersicum
Solyc02g091690.2 1.0kb downstream 1.0kb downstream 2622 true SL2.50ch02: 52927328-52929949 Solanum lycopersicum
Solyc02g091690.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 52928950-52929949 Solanum lycopersicum
Solyc02g091690.2 2.0kb upstream 2.0kb upstream 3622 true SL2.50ch02: 52925328-52928949 Solanum lycopersicum
Solyc02g091690.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 52925328-52927327 Solanum lycopersicum
Solyc02g091690.2 2.0kb downstream 2.0kb downstream 3622 true SL2.50ch02: 52927328-52930949 Solanum lycopersicum
Solyc02g091690.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 52928950-52930949 Solanum lycopersicum
Solyc02g091690.2 5.0kb upstream 5.0kb upstream 6622 true SL2.50ch02: 52922328-52928949 Solanum lycopersicum
Solyc02g091690.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 52922328-52927327 Solanum lycopersicum
Solyc02g091690.2 5.0kb downstream 5.0kb downstream 6622 true SL2.50ch02: 52927328-52933949 Solanum lycopersicum
Solyc02g091690.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 52928950-52933949 Solanum lycopersicum
Solyc02g091690.2 10.0kb upstream 10.0kb upstream 11622 true SL2.50ch02: 52917328-52928949 Solanum lycopersicum
Solyc02g091690.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 52917328-52927327 Solanum lycopersicum
Solyc02g091690.2 10.0kb downstream 10.0kb downstream 11622 true SL2.50ch02: 52927328-52938949 Solanum lycopersicum
Solyc02g091690.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 52928950-52938949 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121388850 5263 Asterids View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain