Gene : Solyc02g091120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10459:SF38 - DNA LIGASE Description:  DNA ligase (AHRD V1 ***- B9SPY8_RICCO); contains Interpro domain(s) IPR000977 ATP-dependent DNA ligase
Genomic Order:  2985 Name:  ? Solyc02g091120.2
Secondary Identifier:  ? PAC:36159163
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g091120.2 0.5kb upstream 0.5kb upstream 19827 true SL2.50ch02: 52523572-52543398 Solanum lycopersicum
Solyc02g091120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 52542899-52543398 Solanum lycopersicum
Solyc02g091120.2 0.5kb downstream 0.5kb downstream 19827 true SL2.50ch02: 52523072-52542898 Solanum lycopersicum
Solyc02g091120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 52523072-52523571 Solanum lycopersicum
Solyc02g091120.2 1.0kb upstream 1.0kb upstream 20327 true SL2.50ch02: 52523572-52543898 Solanum lycopersicum
Solyc02g091120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 52542899-52543898 Solanum lycopersicum
Solyc02g091120.2 1.0kb downstream 1.0kb downstream 20327 true SL2.50ch02: 52522572-52542898 Solanum lycopersicum
Solyc02g091120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 52522572-52523571 Solanum lycopersicum
Solyc02g091120.2 2.0kb upstream 2.0kb upstream 21327 true SL2.50ch02: 52523572-52544898 Solanum lycopersicum
Solyc02g091120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 52542899-52544898 Solanum lycopersicum
Solyc02g091120.2 2.0kb downstream 2.0kb downstream 21327 true SL2.50ch02: 52521572-52542898 Solanum lycopersicum
Solyc02g091120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 52521572-52523571 Solanum lycopersicum
Solyc02g091120.2 5.0kb upstream 5.0kb upstream 24327 true SL2.50ch02: 52523572-52547898 Solanum lycopersicum
Solyc02g091120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 52542899-52547898 Solanum lycopersicum
Solyc02g091120.2 5.0kb downstream 5.0kb downstream 24327 true SL2.50ch02: 52518572-52542898 Solanum lycopersicum
Solyc02g091120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 52518572-52523571 Solanum lycopersicum
Solyc02g091120.2 10.0kb upstream 10.0kb upstream 29327 true SL2.50ch02: 52523572-52552898 Solanum lycopersicum
Solyc02g091120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 52542899-52552898 Solanum lycopersicum
Solyc02g091120.2 10.0kb downstream 10.0kb downstream 29327 true SL2.50ch02: 52513572-52542898 Solanum lycopersicum
Solyc02g091120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 52513572-52523571 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475155 5263 Asterids View MSA
123738713 5271 Pentapetalae View MSA
122788649 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain