Gene : Solyc02g085870.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR31561:SF5 - 3-KETOACYL-COA SYNTHASE 5-RELATED Description:  Fatty acid elongase 3-ketoacyl-CoA synthase (AHRD V1 **** Q6DUV5_BRANA); contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthase
Genomic Order:  2464 Name:  ? Solyc02g085870.2
Secondary Identifier:  ? PAC:36157691
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5080 Solanum lycopersicum pathologic  
Slycopersicum PWY-6433 Solanum lycopersicum pathologic  
Slycopersicum PWY-6598 Solanum lycopersicum pathologic  
Slycopersicum PWY-7036 Solanum lycopersicum pathologic  
Slycopersicum PWY-7601 Solanum lycopersicum pathologic  
Slycopersicum PWY-7619 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g085870.2 0.5kb upstream 0.5kb upstream 2741 true SL2.50ch02: 48650627-48653367 Solanum lycopersicum
Solyc02g085870.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 48650627-48651126 Solanum lycopersicum
Solyc02g085870.2 0.5kb downstream 0.5kb downstream 2741 true SL2.50ch02: 48651127-48653867 Solanum lycopersicum
Solyc02g085870.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 48653368-48653867 Solanum lycopersicum
Solyc02g085870.2 1.0kb upstream 1.0kb upstream 3241 true SL2.50ch02: 48650127-48653367 Solanum lycopersicum
Solyc02g085870.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 48650127-48651126 Solanum lycopersicum
Solyc02g085870.2 1.0kb downstream 1.0kb downstream 3241 true SL2.50ch02: 48651127-48654367 Solanum lycopersicum
Solyc02g085870.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 48653368-48654367 Solanum lycopersicum
Solyc02g085870.2 2.0kb upstream 2.0kb upstream 4241 true SL2.50ch02: 48649127-48653367 Solanum lycopersicum
Solyc02g085870.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 48649127-48651126 Solanum lycopersicum
Solyc02g085870.2 2.0kb downstream 2.0kb downstream 4241 true SL2.50ch02: 48651127-48655367 Solanum lycopersicum
Solyc02g085870.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 48653368-48655367 Solanum lycopersicum
Solyc02g085870.2 5.0kb upstream 5.0kb upstream 7241 true SL2.50ch02: 48646127-48653367 Solanum lycopersicum
Solyc02g085870.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 48646127-48651126 Solanum lycopersicum
Solyc02g085870.2 5.0kb downstream 5.0kb downstream 7241 true SL2.50ch02: 48651127-48658367 Solanum lycopersicum
Solyc02g085870.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 48653368-48658367 Solanum lycopersicum
Solyc02g085870.2 10.0kb upstream 10.0kb upstream 12241 true SL2.50ch02: 48641127-48653367 Solanum lycopersicum
Solyc02g085870.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 48641127-48651126 Solanum lycopersicum
Solyc02g085870.2 10.0kb downstream 10.0kb downstream 12241 true SL2.50ch02: 48651127-48663367 Solanum lycopersicum
Solyc02g085870.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 48653368-48663367 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480328 5263 Asterids View MSA
123744253 5271 Pentapetalae View MSA
122788881 5272 Eudicot View MSA
122042493 5273 Angiosperm View MSA
121309978 5274 Embryophyte View MSA
123347592 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain