Gene : Solyc02g087250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF01985//PF13883 - CRS1 / YhbY (CRM) domain (CRS1_YhbY) // Pyridoxamine 5'-phosphate oxidase (Pyrid_oxidase_2) Description:  Group II intron splicing factor CRS1-like (AHRD V1 *--- Q5JK63_ORYSJ); contains Interpro domain(s) IPR001890 RNA-binding, CRM domain
Genomic Order:  2601 Name:  ? Solyc02g087250.2
Secondary Identifier:  ? PAC:36157618
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g087250.2 0.5kb upstream 0.5kb upstream 12054 true SL2.50ch02: 49695875-49707928 Solanum lycopersicum
Solyc02g087250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 49707429-49707928 Solanum lycopersicum
Solyc02g087250.2 0.5kb downstream 0.5kb downstream 12054 true SL2.50ch02: 49695375-49707428 Solanum lycopersicum
Solyc02g087250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 49695375-49695874 Solanum lycopersicum
Solyc02g087250.2 1.0kb upstream 1.0kb upstream 12554 true SL2.50ch02: 49695875-49708428 Solanum lycopersicum
Solyc02g087250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 49707429-49708428 Solanum lycopersicum
Solyc02g087250.2 1.0kb downstream 1.0kb downstream 12554 true SL2.50ch02: 49694875-49707428 Solanum lycopersicum
Solyc02g087250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 49694875-49695874 Solanum lycopersicum
Solyc02g087250.2 2.0kb upstream 2.0kb upstream 13554 true SL2.50ch02: 49695875-49709428 Solanum lycopersicum
Solyc02g087250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 49707429-49709428 Solanum lycopersicum
Solyc02g087250.2 2.0kb downstream 2.0kb downstream 13554 true SL2.50ch02: 49693875-49707428 Solanum lycopersicum
Solyc02g087250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 49693875-49695874 Solanum lycopersicum
Solyc02g087250.2 5.0kb upstream 5.0kb upstream 16554 true SL2.50ch02: 49695875-49712428 Solanum lycopersicum
Solyc02g087250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 49707429-49712428 Solanum lycopersicum
Solyc02g087250.2 5.0kb downstream 5.0kb downstream 16554 true SL2.50ch02: 49690875-49707428 Solanum lycopersicum
Solyc02g087250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 49690875-49695874 Solanum lycopersicum
Solyc02g087250.2 10.0kb upstream 10.0kb upstream 21554 true SL2.50ch02: 49695875-49717428 Solanum lycopersicum
Solyc02g087250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 49707429-49717428 Solanum lycopersicum
Solyc02g087250.2 10.0kb downstream 10.0kb downstream 21554 true SL2.50ch02: 49685875-49707428 Solanum lycopersicum
Solyc02g087250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 49685875-49695874 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466692 5263 Asterids View MSA
123736632 5271 Pentapetalae View MSA
122792213 5272 Eudicot View MSA
122044793 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain