Gene : Solyc01g066070.2 S. lycopersicum ITAG2.4
Defline:  (1 of 15) K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Description:  Polygalacturonase (AHRD V1 ***- Q2M4X6_LILLO); contains Interpro domain(s) IPR012334 Pectin lyase fold
Genomic Order:  1571 Name:  ? Solyc01g066070.2
Secondary Identifier:  ? PAC:36137135
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1081 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g066070.2 0.5kb upstream 0.5kb upstream 3074 true SL2.50ch01: 73046085-73049158 Solanum lycopersicum
Solyc01g066070.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 73048659-73049158 Solanum lycopersicum
Solyc01g066070.2 0.5kb downstream 0.5kb downstream 3074 true SL2.50ch01: 73045585-73048658 Solanum lycopersicum
Solyc01g066070.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 73045585-73046084 Solanum lycopersicum
Solyc01g066070.2 1.0kb upstream 1.0kb upstream 3574 true SL2.50ch01: 73046085-73049658 Solanum lycopersicum
Solyc01g066070.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 73048659-73049658 Solanum lycopersicum
Solyc01g066070.2 1.0kb downstream 1.0kb downstream 3574 true SL2.50ch01: 73045085-73048658 Solanum lycopersicum
Solyc01g066070.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 73045085-73046084 Solanum lycopersicum
Solyc01g066070.2 2.0kb upstream 2.0kb upstream 4574 true SL2.50ch01: 73046085-73050658 Solanum lycopersicum
Solyc01g066070.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 73048659-73050658 Solanum lycopersicum
Solyc01g066070.2 2.0kb downstream 2.0kb downstream 4574 true SL2.50ch01: 73044085-73048658 Solanum lycopersicum
Solyc01g066070.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 73044085-73046084 Solanum lycopersicum
Solyc01g066070.2 5.0kb upstream 5.0kb upstream 7574 true SL2.50ch01: 73046085-73053658 Solanum lycopersicum
Solyc01g066070.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 73048659-73053658 Solanum lycopersicum
Solyc01g066070.2 5.0kb downstream 5.0kb downstream 7574 true SL2.50ch01: 73041085-73048658 Solanum lycopersicum
Solyc01g066070.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 73041085-73046084 Solanum lycopersicum
Solyc01g066070.2 10.0kb upstream 10.0kb upstream 12574 true SL2.50ch01: 73046085-73058658 Solanum lycopersicum
Solyc01g066070.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 73048659-73058658 Solanum lycopersicum
Solyc01g066070.2 10.0kb downstream 10.0kb downstream 12574 true SL2.50ch01: 73036085-73048658 Solanum lycopersicum
Solyc01g066070.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 73036085-73046084 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414258 5263 Asterids View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain