Gene : Solyc01g017370.1 S. lycopersicum ITAG2.4
Defline:  (1 of 11) PF04997 - RNA polymerase Rpb1, domain 1 (RNA_pol_Rpb1_1) Description:  DNA-directed RNA polymerase subunit beta' (AHRD V1 ***- RPOC1_SOLLC); contains Interpro domain(s) IPR007080 RNA polymerase Rpb1, domain 1
Genomic Order:  924 Name:  ? Solyc01g017370.1
Secondary Identifier:  ? PAC:36138788
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g017370.1 0.5kb upstream 0.5kb upstream 1831 true SL2.50ch01: 23941252-23943082 Solanum lycopersicum
Solyc01g017370.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 23941252-23941751 Solanum lycopersicum
Solyc01g017370.1 0.5kb downstream 0.5kb downstream 1831 true SL2.50ch01: 23941752-23943582 Solanum lycopersicum
Solyc01g017370.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 23943083-23943582 Solanum lycopersicum
Solyc01g017370.1 1.0kb upstream 1.0kb upstream 2331 true SL2.50ch01: 23940752-23943082 Solanum lycopersicum
Solyc01g017370.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 23940752-23941751 Solanum lycopersicum
Solyc01g017370.1 1.0kb downstream 1.0kb downstream 2331 true SL2.50ch01: 23941752-23944082 Solanum lycopersicum
Solyc01g017370.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 23943083-23944082 Solanum lycopersicum
Solyc01g017370.1 2.0kb upstream 2.0kb upstream 3331 true SL2.50ch01: 23939752-23943082 Solanum lycopersicum
Solyc01g017370.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 23939752-23941751 Solanum lycopersicum
Solyc01g017370.1 2.0kb downstream 2.0kb downstream 3331 true SL2.50ch01: 23941752-23945082 Solanum lycopersicum
Solyc01g017370.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 23943083-23945082 Solanum lycopersicum
Solyc01g017370.1 5.0kb upstream 5.0kb upstream 6331 true SL2.50ch01: 23936752-23943082 Solanum lycopersicum
Solyc01g017370.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 23936752-23941751 Solanum lycopersicum
Solyc01g017370.1 5.0kb downstream 5.0kb downstream 6331 true SL2.50ch01: 23941752-23948082 Solanum lycopersicum
Solyc01g017370.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 23943083-23948082 Solanum lycopersicum
Solyc01g017370.1 10.0kb upstream 10.0kb upstream 11331 true SL2.50ch01: 23931752-23943082 Solanum lycopersicum
Solyc01g017370.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 23931752-23941751 Solanum lycopersicum
Solyc01g017370.1 10.0kb downstream 10.0kb downstream 11331 true SL2.50ch01: 23941752-23953082 Solanum lycopersicum
Solyc01g017370.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 23943083-23953082 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479566 5263 Asterids View MSA
123750020 5271 Pentapetalae View MSA
122797399 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain