Gene : Solyc01g009080.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23308//PTHR23308:SF29 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 // SUBFAMILY NOT NAMED Description:  FHA domain containing protein (AHRD V1 ***- B6TP39_MAIZE); contains Interpro domain(s) IPR000253 Forkhead-associated
Genomic Order:  408 Name:  ? Solyc01g009080.2
Secondary Identifier:  ? PAC:36141408
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g009080.2 0.5kb upstream 0.5kb upstream 3427 true SL2.50ch01: 3090552-3093978 Solanum lycopersicum
Solyc01g009080.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 3090552-3091051 Solanum lycopersicum
Solyc01g009080.2 0.5kb downstream 0.5kb downstream 3427 true SL2.50ch01: 3091052-3094478 Solanum lycopersicum
Solyc01g009080.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 3093979-3094478 Solanum lycopersicum
Solyc01g009080.2 1.0kb upstream 1.0kb upstream 3927 true SL2.50ch01: 3090052-3093978 Solanum lycopersicum
Solyc01g009080.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 3090052-3091051 Solanum lycopersicum
Solyc01g009080.2 1.0kb downstream 1.0kb downstream 3927 true SL2.50ch01: 3091052-3094978 Solanum lycopersicum
Solyc01g009080.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 3093979-3094978 Solanum lycopersicum
Solyc01g009080.2 2.0kb upstream 2.0kb upstream 4927 true SL2.50ch01: 3089052-3093978 Solanum lycopersicum
Solyc01g009080.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 3089052-3091051 Solanum lycopersicum
Solyc01g009080.2 2.0kb downstream 2.0kb downstream 4927 true SL2.50ch01: 3091052-3095978 Solanum lycopersicum
Solyc01g009080.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 3093979-3095978 Solanum lycopersicum
Solyc01g009080.2 5.0kb upstream 5.0kb upstream 7927 true SL2.50ch01: 3086052-3093978 Solanum lycopersicum
Solyc01g009080.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 3086052-3091051 Solanum lycopersicum
Solyc01g009080.2 5.0kb downstream 5.0kb downstream 7927 true SL2.50ch01: 3091052-3098978 Solanum lycopersicum
Solyc01g009080.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 3093979-3098978 Solanum lycopersicum
Solyc01g009080.2 10.0kb upstream 10.0kb upstream 12927 true SL2.50ch01: 3081052-3093978 Solanum lycopersicum
Solyc01g009080.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 3081052-3091051 Solanum lycopersicum
Solyc01g009080.2 10.0kb downstream 10.0kb downstream 12927 true SL2.50ch01: 3091052-3103978 Solanum lycopersicum
Solyc01g009080.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 3093979-3103978 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474897 5263 Asterids View MSA
123741066 5271 Pentapetalae View MSA
122770002 5272 Eudicot View MSA
122042553 5273 Angiosperm View MSA
121344574 5274 Embryophyte View MSA
123426095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain