Gene : Solyc01g008790.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Description:  Phosphoesterase family protein (AHRD V1 ***- D7LEV5_ARALY); contains Interpro domain(s) IPR007312 Phosphoesterase
Genomic Order:  379 Name:  ? Solyc01g008790.2
Secondary Identifier:  ? PAC:36138862
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPASYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g008790.2 0.5kb upstream 0.5kb upstream 5163 true SL2.50ch01: 2825878-2831040 Solanum lycopersicum
Solyc01g008790.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 2825878-2826377 Solanum lycopersicum
Solyc01g008790.2 0.5kb downstream 0.5kb downstream 5163 true SL2.50ch01: 2826378-2831540 Solanum lycopersicum
Solyc01g008790.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 2831041-2831540 Solanum lycopersicum
Solyc01g008790.2 1.0kb upstream 1.0kb upstream 5663 true SL2.50ch01: 2825378-2831040 Solanum lycopersicum
Solyc01g008790.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 2825378-2826377 Solanum lycopersicum
Solyc01g008790.2 1.0kb downstream 1.0kb downstream 5663 true SL2.50ch01: 2826378-2832040 Solanum lycopersicum
Solyc01g008790.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 2831041-2832040 Solanum lycopersicum
Solyc01g008790.2 2.0kb upstream 2.0kb upstream 6663 true SL2.50ch01: 2824378-2831040 Solanum lycopersicum
Solyc01g008790.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 2824378-2826377 Solanum lycopersicum
Solyc01g008790.2 2.0kb downstream 2.0kb downstream 6663 true SL2.50ch01: 2826378-2833040 Solanum lycopersicum
Solyc01g008790.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 2831041-2833040 Solanum lycopersicum
Solyc01g008790.2 5.0kb upstream 5.0kb upstream 9663 true SL2.50ch01: 2821378-2831040 Solanum lycopersicum
Solyc01g008790.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 2821378-2826377 Solanum lycopersicum
Solyc01g008790.2 5.0kb downstream 5.0kb downstream 9663 true SL2.50ch01: 2826378-2836040 Solanum lycopersicum
Solyc01g008790.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 2831041-2836040 Solanum lycopersicum
Solyc01g008790.2 10.0kb upstream 10.0kb upstream 14663 true SL2.50ch01: 2816378-2831040 Solanum lycopersicum
Solyc01g008790.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 2816378-2826377 Solanum lycopersicum
Solyc01g008790.2 10.0kb downstream 10.0kb downstream 14663 true SL2.50ch01: 2826378-2841040 Solanum lycopersicum
Solyc01g008790.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 2831041-2841040 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414510 5263 Asterids View MSA
123747870 5271 Pentapetalae View MSA
122794639 5272 Eudicot View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain