Gene : Solyc01g010430.2 S. lycopersicum ITAG2.4
Defline:  (1 of 7) PTHR31205:SF2 - ACTIN CROSS-LINKING PROTEIN Description:  cDNA clone J023121M11 full insert sequence (AHRD V1 **-- B7F743_ORYSJ); contains Interpro domain(s) IPR007679 Protein of unknown function DUF569
Genomic Order:  543 Name:  ? Solyc01g010430.2
Secondary Identifier:  ? PAC:36138381
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g010430.2 0.5kb upstream 0.5kb upstream 3891 true SL2.50ch01: 5338404-5342294 Solanum lycopersicum
Solyc01g010430.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 5338404-5338903 Solanum lycopersicum
Solyc01g010430.2 0.5kb downstream 0.5kb downstream 3891 true SL2.50ch01: 5338904-5342794 Solanum lycopersicum
Solyc01g010430.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 5342295-5342794 Solanum lycopersicum
Solyc01g010430.2 1.0kb upstream 1.0kb upstream 4391 true SL2.50ch01: 5337904-5342294 Solanum lycopersicum
Solyc01g010430.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 5337904-5338903 Solanum lycopersicum
Solyc01g010430.2 1.0kb downstream 1.0kb downstream 4391 true SL2.50ch01: 5338904-5343294 Solanum lycopersicum
Solyc01g010430.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 5342295-5343294 Solanum lycopersicum
Solyc01g010430.2 2.0kb upstream 2.0kb upstream 5391 true SL2.50ch01: 5336904-5342294 Solanum lycopersicum
Solyc01g010430.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 5336904-5338903 Solanum lycopersicum
Solyc01g010430.2 2.0kb downstream 2.0kb downstream 5391 true SL2.50ch01: 5338904-5344294 Solanum lycopersicum
Solyc01g010430.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 5342295-5344294 Solanum lycopersicum
Solyc01g010430.2 5.0kb upstream 5.0kb upstream 8391 true SL2.50ch01: 5333904-5342294 Solanum lycopersicum
Solyc01g010430.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 5333904-5338903 Solanum lycopersicum
Solyc01g010430.2 5.0kb downstream 5.0kb downstream 8391 true SL2.50ch01: 5338904-5347294 Solanum lycopersicum
Solyc01g010430.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 5342295-5347294 Solanum lycopersicum
Solyc01g010430.2 10.0kb upstream 10.0kb upstream 13391 true SL2.50ch01: 5328904-5342294 Solanum lycopersicum
Solyc01g010430.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 5328904-5338903 Solanum lycopersicum
Solyc01g010430.2 10.0kb downstream 10.0kb downstream 13391 true SL2.50ch01: 5338904-5352294 Solanum lycopersicum
Solyc01g010430.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 5342295-5352294 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121413877 5263 Asterids View MSA
123752337 5271 Pentapetalae View MSA
122792795 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain